Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3718 |
Symbol | |
ID | 4070468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4396104 |
End bp | 4396664 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637985741 |
Product | hypothetical protein |
Protein accession | YP_592793 |
Protein GI | 94970745 |
COG category | [S] Function unknown |
COG ID | [COG3059] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00204077 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA CATCTACTGA AACAACGAAT GTGTGGGCAG GCATCATAGC GCGAATCGAT CCAATCGGAC ATGCGTTTCT GCGCTACGGT TTGGCGGTCG TAATTGGTTG GATCGCAGCG ATGAAGGTCA CGGAATACGA GGCGAAAGGC ATTCAACCTC TCATTGCGCA TAGTCCATTT CTGGGCTGGG GCTACAGCAT TTGGACTGTG CGTCAGCTCG CGATGATAAT AGGCGCCATC GAGCTCGCCA TCGCTGCGTT GATTGCGATT CGTCGCTGGT TTCCGAAGCT ATCTGCTATC GGAAGTGTAG GCGCGGTGTT CATGTTTCTG ATCACGTTGT CATTCATCAT CACAACTCCA GGTTGGGAGC CAAGCCTCGG CGGTTTTCCT GCGCTTTCAG CTGGTATAGG AGAGTTTCTG ATAAAAGACC TGGTTTTGCT CGGAGCCTCG CTATGGACAC TGACGGACTC GCTCACTGCC GTCTCCTTTC AGCCCGACAT CGACGTCGAA CCACTCAAGA AACAGGAACG AGATACTGTC TTGCCTCATC GCGTCCACTG A
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Protein sequence | MKNTSTETTN VWAGIIARID PIGHAFLRYG LAVVIGWIAA MKVTEYEAKG IQPLIAHSPF LGWGYSIWTV RQLAMIIGAI ELAIAALIAI RRWFPKLSAI GSVGAVFMFL ITLSFIITTP GWEPSLGGFP ALSAGIGEFL IKDLVLLGAS LWTLTDSLTA VSFQPDIDVE PLKKQERDTV LPHRVH
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