| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3686 |
|---|
| Symbol | |
|---|
| ID | 4070436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4360026 |
|---|
| End bp | 4360622 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637985709 |
|---|
| Product | imidazole glycerol phosphate synthase subunit hisH |
|---|
| Protein accession | YP_592761 |
|---|
| Protein GI | 94970713 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0118] Glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.841288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCAA TTGTTGATTA CGGCGCCGGC AATCTGACTT CAGTGGCCAA GGCATTGCGG
CATCTTGGAG CACTGGTTGA GATTACTGCC GATCCGATCG CCGTGGCCGC AGCCGATGCC
GTAGTTCTGC CGGGCGTAGG CCACTTCGCG TCGACGCAGA CGATCGGCCA GCAAGGACTG
ACGCCGGCGA TTCGCGATGC GATCGCGAGC GACAAGCCGT TTCTTGGAAT CTGCGTGGGA
CTGCAGTGGG TTTTCGCGGG GAGTGCAGAG GCGCCGGAAA CTGCGGGACT CGGTTGTTTT
GATGCCACGT GCGAGCGTTT CCCCGCAGGA GCGCGGGTGC CGCATGTGGG CTGGAACCAA
CTTGAGATCA CTAGGCCGTC GCGCTTACTG GAAGGCGTTC GGAATGACGC TCACGTTTAC
TACACACATT CTTACTTCGC CCCGGTGGTT CCGGAGACTG TCGCGACGAC GGAGTATGGC
TGCGATTTCA CCGCAGTCGT GGAGAGAGGG AATACCTTCG CGGTGCAGTT TCATCCGGAA
AAATCTGGCG AGAACGGGCT CACGATCCTT CGCAATTTCG TGAGGCTCGC ATGCTGA
|
|---|
| Protein sequence | MIAIVDYGAG NLTSVAKALR HLGALVEITA DPIAVAAADA VVLPGVGHFA STQTIGQQGL
TPAIRDAIAS DKPFLGICVG LQWVFAGSAE APETAGLGCF DATCERFPAG ARVPHVGWNQ
LEITRPSRLL EGVRNDAHVY YTHSYFAPVV PETVATTEYG CDFTAVVERG NTFAVQFHPE
KSGENGLTIL RNFVRLAC
|
|---|
| |