Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3663 |
Symbol | |
ID | 4072266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4334778 |
End bp | 4335383 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637985686 |
Product | TetR family transcriptional regulator |
Protein accession | YP_592738 |
Protein GI | 94970690 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.579152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAACA GTGAGCGAGC CAAGCCTTCA AAAGCCTCTT CGAAGAGTGT TAAGGCGACA GACGCTCGCA TTCGCCGCAC TCACGAACGC CTTGGCCTGG CTCTCATCGA GCTCATTCTC GACAATCCGA TCGATACGGT GACTGTCCAG GACGTGCTTG ATCGCGCCGG TGTTGGACGC TCCACGTTTT ATCTCCACTA TCGCGACAAA GACGACCTGC TCTGGACCCA GTTGGAGCAA TTCTTCGAAA TCATGAGCAA CCTGCTCGAT AGCAAGAAGG AAGTGTCACG CCGCGTATTG CCGGTCCGCG AAATGCTCGA GCACGTCGGT ATCGAGAACA AAATTTATCG CGCCCTCGCC GACTCCGGCC GTCTGCACGA CTTCTTCGAC CTCGCGCAGC AATACTTCGC CCGCTCCATC GAGAAGCGTC TTAGCGGATA CCGAAAGCTT TTGAATATTT CTGGAGACGA ATTGACCGCG CGCGCAAACG CTCTCGCCGG AAGCTATCTC GCGCTGATGC GCTGGTGGAT CGACAGCAAA GGAAAGCTCC CACCCCAGGC AGTCGACGAC TTATTTCACG GAATGGTCTG GAAGGGCTTG GAATAG
|
Protein sequence | MSNSERAKPS KASSKSVKAT DARIRRTHER LGLALIELIL DNPIDTVTVQ DVLDRAGVGR STFYLHYRDK DDLLWTQLEQ FFEIMSNLLD SKKEVSRRVL PVREMLEHVG IENKIYRALA DSGRLHDFFD LAQQYFARSI EKRLSGYRKL LNISGDELTA RANALAGSYL ALMRWWIDSK GKLPPQAVDD LFHGMVWKGL E
|
| |