| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3659 |
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| Symbol | |
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| ID | 4072262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4329780 |
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| End bp | 4330868 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637985682 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_592734 |
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| Protein GI | 94970686 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAC TCGACCCTCG AGGCCATCAT TCCACCATGT TTGACTCCGC AGGCGCCGAC
CACAAGCGGC AGTTACAGGA GTTGGGTATC TTTCACGACG TCGCCAAAGC GCTGACGTCG
TCGCTGAACC TCGACTCCAT CCTGCAGACC ATTATGGAAA AGATGGCGGA ATATTTCCGC
CCCGATACCT GGTCACTCCT CATGGTGGAT GAGGAGAAAT CTGAGCTTTA TTTCGCCATC
GCTGTCGGTG ACGCCGCGGA GGCCCTCAAA ACCGTTCGCC TGAAACTCGG CGAAGGCATA
GCGGGATGGG TCGCACAGCA CGGCGAAAGC CTTCTCGTTC CCGACGTCTA TACCGATCCG
CGTTTTGCCA AGCGCATCGA CGAGATGACC AAGTGGCAGA CGCGCTCGAT TATCTGCATT
CCGCTCAAAT CGAAGCACCG CGTCCTCGGC GTGATCCAGT TGATCAACGT GGATATGCAA
GGCTTCGGCG GAAACGAGAT GCTGCTGCTG CAGGCGCTCG CCGATTACGC CGCCATCGCC
ATCGATAATG CCCGCGCCGT CGAGAAGATC CAGGAGTTGA CGATCACCGA CGACTGCACC
GGCCTCTACA ACGCGCGCCA TCTCTACAAA ACGCTCGAAG CCGAGGTCTA CCGCTCCACC
CGTTTCGGCT ACGAGTTCAG CATCCTGTTC CTCGACCTCG ACCACTTCAA GTCGGTGAAC
GATACGCACG GCCACCTCGT CGGCAGCCGC TTACTCGCGG AGATCGGCTA CGCCATTAAG
GCGCACCTTC GCTTGATTGA CTATGCCTTC CGCTATGGTG GCGACGAATT TGTCGTGCTG
TTGCCGCAGA CGTCGAAAGA GTCGGCGTTA GTTGTAGCCC GCCGCTTGCG CGATGTTTTC
CGTAATGAAT ATTGGCTGAA ACCAGAGGGT CTGAATCTCA ATGTGCGCGC CAGCATGGGT
GTCGCAACGT TCCCGGAGGA CGCAAAGTCC TCGCACGAAA TCATCCGCCA GGCCGACGAA
ATGATGTACG CGGTAAAAAA CACCACGCGC GATAACGTAA GCGTCGCCCG CCAAGGCATG
CTGACCTAA
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| Protein sequence | MSQLDPRGHH STMFDSAGAD HKRQLQELGI FHDVAKALTS SLNLDSILQT IMEKMAEYFR
PDTWSLLMVD EEKSELYFAI AVGDAAEALK TVRLKLGEGI AGWVAQHGES LLVPDVYTDP
RFAKRIDEMT KWQTRSIICI PLKSKHRVLG VIQLINVDMQ GFGGNEMLLL QALADYAAIA
IDNARAVEKI QELTITDDCT GLYNARHLYK TLEAEVYRST RFGYEFSILF LDLDHFKSVN
DTHGHLVGSR LLAEIGYAIK AHLRLIDYAF RYGGDEFVVL LPQTSKESAL VVARRLRDVF
RNEYWLKPEG LNLNVRASMG VATFPEDAKS SHEIIRQADE MMYAVKNTTR DNVSVARQGM
LT
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