| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3649 |
|---|
| Symbol | |
|---|
| ID | 4072252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4319155 |
|---|
| End bp | 4319622 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637985672 |
|---|
| Product | hemerythrin-like, metal-binding |
|---|
| Protein accession | YP_592724 |
|---|
| Protein GI | 94970676 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2703] Hemerythrin |
|---|
| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.16393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAG TGGGTGTGCG AGACCGGCTC ACCTTCGGCA TCCCTCGGCT CGATTCGCAG
CACGAGCAAC TCCTGCAGTT AGTGCGGCAG ATGCGCGAGG CCGATGCCGG AGGAAAATCG
CTGTGCGAGT TACGCCTGCT GGCGGCTACG CTTACCCTCC ATACCCGTAT GCATTTCATG
GACGAAGAAA TGTTCATGGA AGGTGCTGGG TATCCCGGAC TGGAAGCGCA CCGCCGTCGC
CACGCGGAGT TCACCGAGGG ACTTCTGCGT TTGCAATCCG GATTGTTATC CACGTCGAGG
AGCCAATTCG CCAGGATCGT GGAATACGAA CTCGGCTGGA TCCATCAGCA CCTCGAGGAC
GAAGACAATG AACTCGGACG CTGGCTGGAA GAGAATAAAA TCTTCGCCGA ATCCCTCGAT
TGGGAAGCGC CACCTGGTCC CGGTTCCATT CCGATATCGT CCCCCTAA
|
|---|
| Protein sequence | MDEVGVRDRL TFGIPRLDSQ HEQLLQLVRQ MREADAGGKS LCELRLLAAT LTLHTRMHFM
DEEMFMEGAG YPGLEAHRRR HAEFTEGLLR LQSGLLSTSR SQFARIVEYE LGWIHQHLED
EDNELGRWLE ENKIFAESLD WEAPPGPGSI PISSP
|
|---|
| |