| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3622 |
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| Symbol | |
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| ID | 4070142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4285579 |
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| End bp | 4288986 |
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| Gene Length | 3408 bp |
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| Protein Length | 1135 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637985645 |
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| Product | DNA helicase/exodeoxyribonuclease V, subunit A |
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| Protein accession | YP_592697 |
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| Protein GI | 94970649 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.750566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGTA ACGCGCGCCT CCAGCTGCAA ATTGCGCCCG ATGCCGACGA GCGCGCCAAG
GTGCTCGACG CAACGCGGTC CTTCATCGTG CAAGCCCCGG CGGGCTCAGG CAAGACCGAG
CTGTTGATGC AGCGCTATCT CACGCTTCTT GCGCACGAGA GTGTCACAAC CCCAGAGAGC
GTGCTGGCGA TCACCTTCAC GCGCAAAGCA GCGGCGGAGA TGCGCAACCG CGTTTTGAAG
GCGCTCGAGA GCGCCAACGG ACCTGCGCCG GAGAGCGCCC ACGCCTTACT GTCTTGGGAA
TTGGCGCGCA AGGTGATGGC GCGCGATCGT GCGATGGGGT GGAACATCCT GCAAAACCCC
GAGCAGTTAG AGATCCGGAC GGTAGATTCG TTTTGCGAGA AGATCGCGAA CCGCACGCCG
CTGCTTGCCG GCCTCGGGCG CTCGCCGGCC ATCGCGGAAG ATTTCGAACC CTTGTATTCC
GAAGCAGCTC AGCGAACGCT CCTGATGCTC GGCGACGAAA AGGCCGAGAC CCGCGAGGCA
ATGTCCCAAG TTCTGGCCGA CCAGGACAAC AGCTTCGACC GAGTGCAGGG CCTGATTGTC
GAGCTCCTGA AACGAAGAGA GCAATGGGGG CGGCTGATTG GCGGGGCATA CCAACGTTCG
GAAGAAGAGC TGAATGCTAC GCGGCAGGAG TTGGAGAGGG CATTACGCGA CGCCATCGCG
CACGAGTTGG AGGGAATACG GCAGCAGCTC TTAGAGGGTG TGCCGGCCCA CGTTTTACAG
GAATTGCTGG ACACCGCGCG TTATGGAGCT GGAAATCTGG AGCCTGAACA CGCGCTCAAT
CCGCTGCGTG ACGTGAACCA ACTCCCGGGC GCGTCGCCCG ACGATCTTCC GCAATGGTTG
GCCCTGGTGC ACTTCTGCCT GAGCAAAGAC AGGGATCTCC GCAAGCCGGG CGGTTACAAC
GTGAATATGG GTTTCCCGGC AGACTCCATG CACCGGGAGC GCAAAGATGC ATGCCATCGC
CTGATCGAGG CGATTGGCAA CAACGACTAT GCGGGCACGC TATGCGCGGC CTTGTCTCGT
GTTGCGAAGC TTCCTCCCCC ACGCTACGAC GACGACCAGT GGAACACCCT GAAGGCCCTG
TTCCGGGTCC TGCCGCTGGC GGTAGGACAT TTGCGGACGG TGTTCGCGGA GCGCGGCGAG
GTAGATTTTT CAGAAATCGC CCTCGCGGCG AAGGCAGCGC TTGGCGAAGA AGGACATCCC
ACCGACCTGG CGTTGCACCT GGGATACAAG ATCCAGCACC TGCTGGTAGA TGAGTTCCAG
GACACTTCCC TCTCACAGGC GGTGTTGTTG GAGCGGTTAA TCCAGGCTTG GTCGCCGGAG
ATGGGCGCAA CGATGTTCGT GGTCGGCGAC CCGATGCAGT CGATTTACGG CTTTCGCCAA
GCCGAGGTCA CACTGTTTAC GCGCAGCTGG AATAGCGGCT TCGCGCAGAT GCCCCTGGAA
CAGGCGCGGC TGACGGCCAA CTTCCGGTCG CGTCCGGAGC TGGTCACCTG GTTCAACCAG
ACCTTTGAAC ACGTCCTGGT AGCGGACAAC GAAGTCACCG GCGCCGTGAA GTATGCCCCC
TCCGAGGCCG CGCGGGAGCC ATCGCAGAAT GCAGGACCTG GGTTTCACTC GGTCGCTTCA
AAAGCGTTCG AAGAAGAGGC AGCACGGGTC ATCGAGGTCC TCCAGCAGGA ACTCAAGGGC
GACGCGAAGT CGATTGCACT CCTCGTGCGA TCGCGGTCGC ATATGGCGCA CATCGCGCCC
GCCCTTCGCG AGGCAGGCAT TGCGTTCCGT TCGAAAGAGA TTGATGTGCT GGGAGAACGG
CAGACGGTAC GGGATCTGCA CGCGATGACC AAGGCGCTGG TGAACCTGGC CGACCGCACG
GCGTGGCTGA CGGTACTGCG TGGCCCGTGG AGCGGCCTAC AACTTGAGGA CCTGTGGACG
CTGTGCAAGG ATGGCGAGAG GAAGACGGTC TGGGAACTAT TGCGGGAGCG TCGCGGCATG
CTCAGCGACC GAGCTCAGAA GGTGCTGGCT CGGACGATGC CGGCCCTGGA TGCAGCGGTG
ACGCAGCGCG GACGAACGTC GTTGCGGGCG CTGGTGGAAT CGTTATGGGT TTCGCTTGGT
GGACCCGCGG CGCTGGGACG GACGGAACGG AAGGCGAAGC TGCGCGATGT GGAAGCGTAT
CTCGACCTGC TGCAGAGAGT GGAGAGCTGC GGCGAAGTGG ACGAAAAACG CTTGGAGCAG
GAAATCTCAA GGCTCTACAC GCGCCCAGAT GCCAGTAGCG AGATTCGCGT GGAGGTGATG
ACGATCCACG GCGCGAAGGG TTTGGAGTTC GACGTCGTCA TTCTCCCGGG ATTGAATCGA
TGGATCCGCA GTGAAGGCGG ACAGTTGCTG AACTGGCGGG AGCGCATAAT CGGCGAAGAA
CGCGACCTAC TGCTCGCGCC CATGGACGCC GTGGGCACGG ATCGAAAAAA GGAAGGGAGC
ATCGCCAACT ATCTCGCGAT GCTGGGCGGC GAGTGTTCCG CGGAAGAAAC CAAGCGACTG
CTCTATGTCG CAGCGACGCG CGCGAAGGAA CGCCTGCACC TGGTGACGAC GATGCCTGCG
GAAAATAAGG AACCGGAGCG CGGAAGCCTG TTGTCGCTGC TTCCGGCTGA GGTTTTCGGC
AGGTTCCTCA AGGTTCCCAC CCCTGAAGCG GAGGACGAGG AGGAACAGCG CACTCCCAAT
CTCTCGCACC GCCTTGTACC CGATTGGCAA TTGCCCGCTG CACCGGAGCC GCTAAAGTTC
GAGACGCGGT ATCCAGTGGC GGCGGACGTA CGTGAGCGCG AGCATACCTT CGAGCGCGTG
CAATTCGATT TGCCGCGCAT TGGCACGGTC ACGCACCGCT TCCTGCAGCA AATTGGCGAT
GAAGGGCCGG GGGGATGGAC CGAAGAGCGC ATCGCGAAGA CGGCGCCGCG CATTCGCGCG
CTGCTGTTGC AGCAAGGGAT TCGTTCATCG GAGCTGGCGA AGTGGGAGGA GACGGTGACT
CGCGCGCTGC GCAATACTCT GGCGCATGAC AAGGGGCAGT GGATCCTGAA ACAGCGGGAA
TCGGCGAGCA ATGAGTACGG GCTGACGTCG GCGCTCGACG GGCCGCGGCG CAGCATCAAA
GTAGATCGCA CCTTCGTCGA GGGCGAAGTG CGCTGGTTGA TTGACTACAA GACGAGCGAC
CAGGAAGGCA CCGTGACCGA GAAATATCTG CAAGAACAGG TCGACAAGTA CCGCGACGAC
CTGGCGCACT ACGCGAGGGT GCTGCGCGCG ATGGACGGCC GCGAGGTAAA AGGCGGCCTC
TACTTCCCTC TTTTGCAAAT CTGGCGCGAG GTGGACGTTC AAAGCTAG
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| Protein sequence | MKSNARLQLQ IAPDADERAK VLDATRSFIV QAPAGSGKTE LLMQRYLTLL AHESVTTPES
VLAITFTRKA AAEMRNRVLK ALESANGPAP ESAHALLSWE LARKVMARDR AMGWNILQNP
EQLEIRTVDS FCEKIANRTP LLAGLGRSPA IAEDFEPLYS EAAQRTLLML GDEKAETREA
MSQVLADQDN SFDRVQGLIV ELLKRREQWG RLIGGAYQRS EEELNATRQE LERALRDAIA
HELEGIRQQL LEGVPAHVLQ ELLDTARYGA GNLEPEHALN PLRDVNQLPG ASPDDLPQWL
ALVHFCLSKD RDLRKPGGYN VNMGFPADSM HRERKDACHR LIEAIGNNDY AGTLCAALSR
VAKLPPPRYD DDQWNTLKAL FRVLPLAVGH LRTVFAERGE VDFSEIALAA KAALGEEGHP
TDLALHLGYK IQHLLVDEFQ DTSLSQAVLL ERLIQAWSPE MGATMFVVGD PMQSIYGFRQ
AEVTLFTRSW NSGFAQMPLE QARLTANFRS RPELVTWFNQ TFEHVLVADN EVTGAVKYAP
SEAAREPSQN AGPGFHSVAS KAFEEEAARV IEVLQQELKG DAKSIALLVR SRSHMAHIAP
ALREAGIAFR SKEIDVLGER QTVRDLHAMT KALVNLADRT AWLTVLRGPW SGLQLEDLWT
LCKDGERKTV WELLRERRGM LSDRAQKVLA RTMPALDAAV TQRGRTSLRA LVESLWVSLG
GPAALGRTER KAKLRDVEAY LDLLQRVESC GEVDEKRLEQ EISRLYTRPD ASSEIRVEVM
TIHGAKGLEF DVVILPGLNR WIRSEGGQLL NWRERIIGEE RDLLLAPMDA VGTDRKKEGS
IANYLAMLGG ECSAEETKRL LYVAATRAKE RLHLVTTMPA ENKEPERGSL LSLLPAEVFG
RFLKVPTPEA EDEEEQRTPN LSHRLVPDWQ LPAAPEPLKF ETRYPVAADV REREHTFERV
QFDLPRIGTV THRFLQQIGD EGPGGWTEER IAKTAPRIRA LLLQQGIRSS ELAKWEETVT
RALRNTLAHD KGQWILKQRE SASNEYGLTS ALDGPRRSIK VDRTFVEGEV RWLIDYKTSD
QEGTVTEKYL QEQVDKYRDD LAHYARVLRA MDGREVKGGL YFPLLQIWRE VDVQS
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