| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3619 |
|---|
| Symbol | |
|---|
| ID | 4070139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4280102 |
|---|
| End bp | 4282147 |
|---|
| Gene Length | 2046 bp |
|---|
| Protein Length | 681 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637985642 |
|---|
| Product | carbon starvation protein CstA |
|---|
| Protein accession | YP_592694 |
|---|
| Protein GI | 94970646 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.186111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.595383 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAACC GCGTGGTTCG TGCCCTCATC TGGGCCGCTG TCATCGTCGT GGGCGCGCTC
TCCATCGCCA CCATCGCACT GCGGCGCGGC GAGTCCATCA ACGCGATGTG GCTGGTCGTG
GCCGCGCTCT GCACCTACGC CGTCGGTTAC CGTTTCTATA GCAAGTTCAT CGCGACCAAA
GTCCTCGTCC TCGACAGCCG TCGAGCCACG CCAGCCGAGC GCCTCGATAA CGGACGCGAT
TTCGTTCCCA CCAACAAATG GGTTGTCTTC GGACACCACT TCGCCGCCAT CGCCGGTCCC
GGCCCGCTCG TCGGCCCGGT ACTCGCGGCG CAATTCGGCT ATCTTCCCGG AACTCTATGG
ATCCTCGTTG GCGCCGTCCT CGGCGGATGC GTGCAGGACT TCGTCACTCT CGTCTTTTCC
GTGCGTCGCG ACGGCAAATC GCTAACCGAA ATGGCCCGCG AAGAGATCGG CAAAGTCGGT
GGCTTCGTGG CATTTTTCGC GGTCGTCGCG ATCATCATCA TCCTGCTCGG CGCGGTTGCG
CTCATCGTCG TCAACGCGCT GAAGGGAAGC CCGTGGGGCA CCTTCACCAT CGGCATGACG
ATCCCGATCG CGCTGCTGAT GGGCCTATAC CTGCGCCGTA TTCGTCCGGG CAAAGTGATG
GAAGCCAGCG TTCTCGGCTT CATCTGCGTA ATGGCTGCGA TCTTTGGCGG ACAATGGGTC
TCGCACACCG CGTACGCCGG ATGGTTCACC TACTCCGCGA CGACGCTCGC CATCGCGATC
ATCATTTACG GCTTTGCCGC CTCGGCGTTG CCGGTCTGGC TGCTGCTTGC GCCGCGTGAT
TACTTGAGCA CCTTCGTGAA ACTCGGCACC ATCGCGATCC TCGCGGTCGG TATCGTGATT
TCGCGGCCGC AACTGCACAT GCCCGCGCTT ACTCGCTTTA TTGACGGCAC TGGGCCGGTC
TTCGCCGGAA ATCTCTTCCC GTTCGCGTTT ATCACCATCG CCTGCGGCGC AATCAGCGGA
TTTCATGCGC TGATCTCGAG CGGCACCACG CCCAAGCTAA TCCAGCGCGA GACGGAAACG
CGCCTCGTCG GCTACGGCGC GATGCTCTGC GAATCGCTGG TTGCAATCAT GGCGACGATC
GCCGCGTGCG TGATCCAGCC CGGCGTGTAC TTCGCGGTGA ATAGCCCGGC GGGCATCGTC
GGCGCCAACC CTGCCGATGC CGCCGCCAAA ATCACTTCCT GGGGATTCCC GGTGGACGCC
GCGCAGATGG CGCAACTCGC GCACGCCGTC GGCGAGCAGA CGCTCTTCAA CCGCACCGGC
GGCGCGCCGG CATTCGCTGT CGGCATGGCG CACATCTTCG CGCACTCGCT CGGTGGCGAG
GCGGTAATGG CGATCTGGTA CCACTTCGCC ATCATGTTCG AGGCGCTTTT CATCCTCACC
GTGCTCGACG CCGGCACCCG CGTTGGGCGC TTCATGCTGC AAGACGCGCT CGGCCACGTG
TGGAAGCCGC TTGGCCGCAC CAGTTCTTAC CCGAGCATCG TGCTGACGTC CGCGATCATC
GTCGGTCTGT GGGGATACTT CCTCTGGCAG GGCGTGAAGG ACCCGCTTGG CGGCATCAAC
TCCATGTGGC CACTCTTCGG CATCTCCAAC CAATTACTTG CTGCGGTCGC GCTTTGCGTT
GCCACCACCA TCGTCATCAA GATGGGCCGC GCCCGCTACG CCTTCGTAAC GCTGGTGCCG
CTGATCGTTT TGGTCGCGAT CACCTTTGGC GCAGCGTACG AAAAAGTCCT CAACCCGAAT
CCGCGAATCG GCTTCCTTGC CCACGCCCGT CAACTCGCGT CGCAGCCCAA CATATCGCAT
CAGACGTCGC AACTGATCTT CAATGACCGC CTCGATGCTG CCATCACCAC GGTGCTCGTC
TTCCTCGTAA GCCTGGTCGT GATCGAATCC ATCATCGAGT GGGTGCGCGT GCTGAGCGGT
CGAAAAGCCG CGACTGTCCG CGAAGCTCCG TTTGTCGCCT CGCACTTCGC GGAGGAACAA
GCATGA
|
|---|
| Protein sequence | MRNRVVRALI WAAVIVVGAL SIATIALRRG ESINAMWLVV AALCTYAVGY RFYSKFIATK
VLVLDSRRAT PAERLDNGRD FVPTNKWVVF GHHFAAIAGP GPLVGPVLAA QFGYLPGTLW
ILVGAVLGGC VQDFVTLVFS VRRDGKSLTE MAREEIGKVG GFVAFFAVVA IIIILLGAVA
LIVVNALKGS PWGTFTIGMT IPIALLMGLY LRRIRPGKVM EASVLGFICV MAAIFGGQWV
SHTAYAGWFT YSATTLAIAI IIYGFAASAL PVWLLLAPRD YLSTFVKLGT IAILAVGIVI
SRPQLHMPAL TRFIDGTGPV FAGNLFPFAF ITIACGAISG FHALISSGTT PKLIQRETET
RLVGYGAMLC ESLVAIMATI AACVIQPGVY FAVNSPAGIV GANPADAAAK ITSWGFPVDA
AQMAQLAHAV GEQTLFNRTG GAPAFAVGMA HIFAHSLGGE AVMAIWYHFA IMFEALFILT
VLDAGTRVGR FMLQDALGHV WKPLGRTSSY PSIVLTSAII VGLWGYFLWQ GVKDPLGGIN
SMWPLFGISN QLLAAVALCV ATTIVIKMGR ARYAFVTLVP LIVLVAITFG AAYEKVLNPN
PRIGFLAHAR QLASQPNISH QTSQLIFNDR LDAAITTVLV FLVSLVVIES IIEWVRVLSG
RKAATVREAP FVASHFAEEQ A
|
|---|
| |