| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3604 |
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| Symbol | |
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| ID | 4072826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4264315 |
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| End bp | 4266969 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637985627 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_592679 |
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| Protein GI | 94970631 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.729467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.137279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA CCGCTTATCT GAGATCGGTC TATGCGAAGT TCTTCCATCG CGAGGAAGTA
GGCGAGGAAC TCGAACTTGA ATTGCGCTCG CACGTCGAGA TGCGTGCCGA CGATCTGGAG
CGCTCGGGAA TGTCGCGCGC GGAAGCAGAA CGGCGGGCGC GGATCGAGTT CGGCAGCCGC
GAACGGGTGC GCGAAGAATC GCACGTCGCC ATGGGCGGAA ACTTCTTCGA CGTATTGCTC
CAGGACCTGC GTTACAGCGT GCGTGTGCTG CGCAAGTCGC CGGGCTTCAC CATCGCCGCG
GTGATGACCC TGGCGCTTGC GATCGGCGCC AACGCGGTGG TGTTCAGCGT CACGAACGCG
TTTCTGATCA AGCCGCTGAA TGTGCCGAAC CCGGAGAGCC TTTACCAGGT GCTTCGCGCC
GACAAGGTTG CGGGCGGCTA TTCCTATCTC AACTATCAGG ACCTACGCGA TAGAAATCGC
ACCTTCGAAG ACCTGGCTGC GTACGACATC GCCACCGCTG CCTTCGATAC GGGCGGTAAG
GCGCGTCCGT CGTGGGTAAT TCTGGCGACC GGCAATTATT TCGACGCGCT GCAGATGAAG
CCATACTTGG GCGAGTACTT CCACGATCGC GACGAGCGTG GTCCCAACAG CGCGCCGTAC
GTCGTGCTGA GCTACTCCTT CTGGCACACG CAATTCCAGG ACGACCGCAC CGTCATCGGC
CGAAAGGTCC GCTTGAACAA GCACGCCTAC ACCGTGATCG GCGTGGCACA GCCGAACTTC
CGCGGCGTGC TGATGTTTTT CAATCCCGAT ATCTTCGTGC CCTTCGTGCA GCAGGAACAG
ATTGAAGGCC AGAACACGAT GAACGCGCGC GGTAAGTCGG CGACGTTCAT GGTGATCGGC
CACCTGAAAT CGGGCATCAC CAAGGCGCAG GCCGCCGCGG ATCTAAACAC GATTGGCGCC
TACCTGCACC AGGCCTTCCC GGCCGACGTC GGCGAGATGA AGTTTGACTT AGGACGTCCG
AATTTTTATG GCGATTATCT CGGGCGTCCG GTGCACGCGT TCCTCACCGG GCTCAGTCTG
CTGGCGGCGT TGATCCTGTT GGCGTCGTGC GCGAACCTCG GAAGCTTGTT TTCGGCACGG
GCTTCCGACC GCTCGCGCGA GATGGCGCTA CGGCTCGCGT TAGGCTCATC GCGGCGACGC
CTGCTGCGCT CGCTCTTCAC CGAAGCGGTA CTGATTTCGC TCGCCGGCGG CACGCTCGGC
GTCACTGCGA GCATCTTCCT GCTGCGCGGG CTCACGCGCT GGCAGCCCTT CGATCGCTGG
CCGCTTCAAG TCACCGTGGA TCCCGACGCG AGGGTGTACA TCGTGTCCCT GCTGATCGCG
CTCGCGGCCG GCTTCATCTT TGGCGCGGTG CCGGTGCGGC AGGTGCTGCA AACCGATCCC
TACGGCGTGA TCAAGGCCGG GACTGCGCAA GGATCGAAGC GTCGCATTAC GATGCGCGAC
GTTCTGGTGG TGGTACAGAT CGCGATCTGC GGGGTGCTGG TGACTTCATC GTTGGTGGCG
CTGCGCGGCT TGGAGCGGTC GCTGCATGCC GATTTCGGCT TCGAACCGCA GCACCGGGTG
ATGGCTGAAC TCGACCTCAA CATGGCCGGT TATAAAGGCG ACGCCGTTCC GGCAACGCAG
AAGAAAATGA TCGACGCGCT GATGACCATC CCCGGCGTGC AGGCCGCAGG CTCGATTGAC
TCGGTACCAC TCGGCGACAC GCCACCGTAC GAGCGCATCT TTGCCGAGAA CGAAGCCGAT
TTGCGTCCGG GAAAAGAGAT GTTCAAAGCC ACGCTGATGA ATGTGACGCC CGGCTATTTG
AAAGCAGCGG GAACCGTAAT GTTCGCCGGT CGCGACTTTA CCTGGGCGGA CGACAAGAAT
GCGCCTCAAG CCGCGATTGT GAATCGCCAA TTCGCCGAAC GCGTGTTCGG CTCGATCGAC
AAGGCCATTG GAGGCCACTT CAAGTTCAAT GACGGCGCAT TGATTCAAGT CGTCGGCGTG
ATACAGAACG GAAAATACGA AAACCTGACC GAGCCATGGC AGCCGGGGGT GTTTCGCCCA
ACGCAGCAGT CGCCCGCGCC GAAGACTGTC ATCATCGTGC ACTCGGACCG CGACGCGCTG
GAAGTGCAGT CGGCAATCCG CGCCAAGCTA CGCGAGATTG ACAGCGAGCT GCCGGTCTTT
ACCGAGACCT GGTACAAGGA ACTCGATGCA AGCCTGTTCG CACCGCGGAT GGCGACGCTT
GCGCTGTGCG TGCTGGGAAC GCTGGGGTCG ATGCTCGCGG TGACCGGCGT CTTCGGCATG
GCCGCGTACT CGGTAAGCAA GCGGCTGCGG GAATTGGGAA TCCGACTGGC GCTGGGCGCC
CGACGGCAGG AACTCGTGTT CGCAGCGCTG GGGCGCGCGT TCAAGCTGAT GTGTTTCGGA
TCGGCGGCGG GACTGGTGCT GGGGATCCTC GCGAGCAAGG TTCTGGCATT TGTGTTCTTT
GAGGCGAACT CGCACGACCC GCTGACTCTG ACGCTCGTCG TGGTGGCGAT GGCGTTGCTT
GGGATGATTG CGACGTGGAT TCCGGCGCAG CGCTCGCTGT CGGTAGACCC GATGATGCTG
TTGCGCGAGG AATGA
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| Protein sequence | MKFTAYLRSV YAKFFHREEV GEELELELRS HVEMRADDLE RSGMSRAEAE RRARIEFGSR
ERVREESHVA MGGNFFDVLL QDLRYSVRVL RKSPGFTIAA VMTLALAIGA NAVVFSVTNA
FLIKPLNVPN PESLYQVLRA DKVAGGYSYL NYQDLRDRNR TFEDLAAYDI ATAAFDTGGK
ARPSWVILAT GNYFDALQMK PYLGEYFHDR DERGPNSAPY VVLSYSFWHT QFQDDRTVIG
RKVRLNKHAY TVIGVAQPNF RGVLMFFNPD IFVPFVQQEQ IEGQNTMNAR GKSATFMVIG
HLKSGITKAQ AAADLNTIGA YLHQAFPADV GEMKFDLGRP NFYGDYLGRP VHAFLTGLSL
LAALILLASC ANLGSLFSAR ASDRSREMAL RLALGSSRRR LLRSLFTEAV LISLAGGTLG
VTASIFLLRG LTRWQPFDRW PLQVTVDPDA RVYIVSLLIA LAAGFIFGAV PVRQVLQTDP
YGVIKAGTAQ GSKRRITMRD VLVVVQIAIC GVLVTSSLVA LRGLERSLHA DFGFEPQHRV
MAELDLNMAG YKGDAVPATQ KKMIDALMTI PGVQAAGSID SVPLGDTPPY ERIFAENEAD
LRPGKEMFKA TLMNVTPGYL KAAGTVMFAG RDFTWADDKN APQAAIVNRQ FAERVFGSID
KAIGGHFKFN DGALIQVVGV IQNGKYENLT EPWQPGVFRP TQQSPAPKTV IIVHSDRDAL
EVQSAIRAKL REIDSELPVF TETWYKELDA SLFAPRMATL ALCVLGTLGS MLAVTGVFGM
AAYSVSKRLR ELGIRLALGA RRQELVFAAL GRAFKLMCFG SAAGLVLGIL ASKVLAFVFF
EANSHDPLTL TLVVVAMALL GMIATWIPAQ RSLSVDPMML LREE
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