| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3600 |
|---|
| Symbol | |
|---|
| ID | 4072822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4258308 |
|---|
| End bp | 4260608 |
|---|
| Gene Length | 2301 bp |
|---|
| Protein Length | 766 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637985623 |
|---|
| Product | periplasmic sensor hybrid histidine kinase |
|---|
| Protein accession | YP_592675 |
|---|
| Protein GI | 94970627 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.35244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.024803 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAATC GCGTTCCAGC GCGAAGTCGT TTTGCTTCGT GGTTTTCCGG GCAATACTGG
TGGCGCGTTC CAGTTGCCAC CATTGTCCTA CTACAAGTTA TAACGCTGAT TGCGTTGCAC
TTGGTGGGCC GGGAAATCAT CGTCGAGAAC TGCCTCGACT TCGGGCTCTC TTCGATCGCA
ATCGTCGTTG CCTGGCAGGC GTCGCGGCGC TCTCGCGGCC TCACCCGTGT CGCGTGGATG
ACGTTGTCGC TCTGCTGCTC GTTTTTCGCT CTATCGCTCG CGATCGGCAT CGGCGCGGAA
GTGCTGCCTT ACACCAGGGC GCTTACCGAA CTCTCCGACG AGATCAGCGT TTTCTGGCTG
GCGCCACTCA GCTTCACGCT TTTCCTCGAA CCTGATTTCG AGTTCCGCGG CTTCGATCCC
ATCCACGTCC TCGACTTCAT CCAGCTCGTG ATCTTCTGGG TCGCGGTCTT CTTCATGTTT
CTGTTCCTCC CCATGCATGT CTTCGTCGGC CAGACGCCTC ATTCCTGGCT GCAAGCTACC
TGGGGCGGAA CCTTGGTCTA CGACCTCTCG ATGACCATGC TGTTCAGCCT GCGCGCCATG
CTCACGCGCT CACGGTCCAC ACGCCGCTTC TTCTGGCGTT TTTCGCTCTT TCTGGTTGTC
GGATGCCTTG CCGATCTTTA CGCCAACTAC AACAAGCTGC CGTCGGCTAC GTGGTTCCAA
CTCGTCTGGA CCGCTCTCAA TATCGCTCCT ATCGTCCTCG CAGGCACGTG GACTGAGGAC
GAAACCGACT GGATTGACGC GAAGAGCAAG GCGGGACGCG TGCTAGGGGA CCAACTCTTC
CCGGTGATGA CCGCTTTCCT CGTGCTCATT CTCTCCATGG TCATCGTCCG CGAGCGCCTT
GGCTTCGCCG TGATGATGGT TTCGATTTCG TTCGTCTGCT CCAGCCTGCG CATGGTGGTG
GTGCAGCAGC GCGAACTGCG CATCGCCGCT GATCTACAGG CGGAGATCGC AGAGCGTCGT
CGCGCTGAAC AATTGCTGCG CGAAAACGAA GAACACCTCG AGGAACAAGT CGCCAACCGC
ACCAGCGAAC TGAGCGAGGC CAACTCGCAA CTACGCTCCG AGATTATCGA GCGCCAGCGA
CTGGAAGAAC AGTTGCGCCA GACGCAAAAG ATGGAAGCGA TCGGCACACT CTCCGGCGGC
ATCGCGCACG ACTTCAACAA CCTGCTGACG GTGATTCGCG GTTATGCACG CATGGTGCTC
GATCGCGTCG GGAACGATCC TGAGCTTCGC ACCGACGTTG AGCAGATTGA CGAAGCCGGC
GCCCGCGCCG CCGCGCTCAC CAGCCAGTTG CTGGCCTTCA GCCGTCGTCA GATGCTGCAG
CCGCGCACCA TCAACCTCAA CGGTCTCGTT CGCGATCTGC AGAAGATGCT GCAGCGCCTC
ATCGGCGAGC ACATCGAGCT CACTACGCGT GCGGGCGAAG GACTCGGCGC GGTGAAGGCC
GATCCCGGAC AGATCGAGCA GGTCATCCTG AATCTCGTCG TAAATGCGCG CGACGCCATG
CCCCGGGGCG GATCGCTGGT GCTGGAAACG CGAAACGTCC AGGTGGACGA AGCGTTCGCG
CGCGAGCACG TGGACCTTAC GCCCGGCGAT TACGTGATGC TCGCGGTGCA CGATACCGGC
GTGGGCATGG ACGACGCTAC CAAGGTGCAC ATCTTCGAAC CGTTCTTCAC CACCAAGGAA
CGCGCCCGCG GCACCGGCCT CGGCCTCTCG ATGGTTTATG GCATCGTCAA GCAGAGCGGT
GGAAGCATTG TGGTGGAGAG CCAGCTCGCG AAGGGTTCGA GCTTCAAGAT TTTCCTGCCG
CGGATCCAGG CGCGTACCGA AGTCGAGACG GGCTTGCATC CCGTCGCCGT GGGGAAGGGT
TCGGAAATCG TGTTGCTCGT GGAAGACGAC GAGCAGGTGC GCAACCTGAC GCTCACCATG
CTGCGCCGCT TTGGCTATAC CGTGTACGTG GCCGAGAACG GCACCGAAGC CTTGAAATTT
AACGAAACTC ATAGCGGCGA AATCAATTTG CTGCTCACGG ACGTGGTGAT GCCCGGCGCC
AGCGGTCCTG AAATCGCGGT CAAAATTTCG GCCAGCCGGC CAGGCATCAA GGTGCTCTAC
ATGTCCGGTT ACACTGACGA CGCAATCGGC ACCCACGGCA TTCTCGAAGA GGGCATTTCA
CTACTGCAAA AACCATTTAC CCCCGCGGCG CTCGGCGAGC GCGTACGCGA GGTGTTGGAC
GCCGTTCCGG TCAAAGCCTG A
|
|---|
| Protein sequence | MLNRVPARSR FASWFSGQYW WRVPVATIVL LQVITLIALH LVGREIIVEN CLDFGLSSIA
IVVAWQASRR SRGLTRVAWM TLSLCCSFFA LSLAIGIGAE VLPYTRALTE LSDEISVFWL
APLSFTLFLE PDFEFRGFDP IHVLDFIQLV IFWVAVFFMF LFLPMHVFVG QTPHSWLQAT
WGGTLVYDLS MTMLFSLRAM LTRSRSTRRF FWRFSLFLVV GCLADLYANY NKLPSATWFQ
LVWTALNIAP IVLAGTWTED ETDWIDAKSK AGRVLGDQLF PVMTAFLVLI LSMVIVRERL
GFAVMMVSIS FVCSSLRMVV VQQRELRIAA DLQAEIAERR RAEQLLRENE EHLEEQVANR
TSELSEANSQ LRSEIIERQR LEEQLRQTQK MEAIGTLSGG IAHDFNNLLT VIRGYARMVL
DRVGNDPELR TDVEQIDEAG ARAAALTSQL LAFSRRQMLQ PRTINLNGLV RDLQKMLQRL
IGEHIELTTR AGEGLGAVKA DPGQIEQVIL NLVVNARDAM PRGGSLVLET RNVQVDEAFA
REHVDLTPGD YVMLAVHDTG VGMDDATKVH IFEPFFTTKE RARGTGLGLS MVYGIVKQSG
GSIVVESQLA KGSSFKIFLP RIQARTEVET GLHPVAVGKG SEIVLLVEDD EQVRNLTLTM
LRRFGYTVYV AENGTEALKF NETHSGEINL LLTDVVMPGA SGPEIAVKIS ASRPGIKVLY
MSGYTDDAIG THGILEEGIS LLQKPFTPAA LGERVREVLD AVPVKA
|
|---|
| |