| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3599 |
|---|
| Symbol | |
|---|
| ID | 4072821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4255581 |
|---|
| End bp | 4257665 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637985622 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_592674 |
|---|
| Protein GI | 94970626 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.161985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00880556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTCC CGACGCGTCA AAACTCCCTG CTGCCGTGGA AGTGCCTGCT ATTTGCCGGT
TTTGCGGCAT GGCTTGCTTC CATGAGTGCA TTTGCACAAA CCAAACCTTC TGCGGTCACA
ATCACGAAGC CGGCAACGTC CGCGACTATG TTGTCCGAGT TGCCCGCCAG CGAGAAGGCG
ATTCTTGCCC AAGCTCCCGA AAACTTTTAC GAGTTTGGCG CGGCCAAGTT GGGCGAAGTC
ACCGGTCCGC AGCGGTTCAC CGTGCAGTTC GCGCAAACTG CAACCATCAC GAAGATCACT
TCGTCCGCCG ATTTCAAGGT GGAAAGCGAC AGCACCTGCG GGGAAGGACG AACTTATAGC
GCAGGCACCG ATTGCATCCT GATGGTGCGG TTTGTGCCGC AGGGCCCCGG CCACCGAGCA
GGGAAATTGC AGGTGAGCCA TAGTGCAAGC GTGCTGCCGA TGGGCTTTGG AATTGGCGGT
TACGGCTACG CGCCGGTGAT CAGCTTCGTA CCGTCGATCA TCACGACGGT TCCGGCGACA
GTTTCGGCGG GCGTCGGCCT GCTGAACGGC GCCCAGAATC TTGCACTGGC CGGCGATACG
CTGCTGATTG CGGACACTGG CAATGGGAAG GTCCTCTCGA TCGATTCGAC TGGAACGTCG
AAAGCTCTCG CCACCGGTTA TACCGGCGTG TACGGAGTCG CACAGGATAC CTTCGGGCAG
ATTTACTACG ATGTGCCGTC CACCGGCAAG ATGTACGAGA TCTACGACTA CGGCCCGGTC
GTTCAAGTCA GCGGGACGGG CACCATCGCT TGTCCCGCTT CGACTCCATG CACTCTCAGT
TCCGAGGCGC TGGGGACTCC GGGCGCAATG TCCATCGATC CGTACAATCA CCTGTTTTTC
GTTGACAGCC ATCAAGGCGC GGCTTTTTCC ACGGTTCAGC CCATACCCGC GAACCTGATC
TTCCTCTACG ATCCATTTCC GTACCAGCAA AGCCCGTCGG CGACGATGGC CGTGGATTCC
AGCGACAATC TTTACTCGCT CTGGGCAAAC GGTAGCGTCT GCGAAATCGC GCAGCAGTCG
TTGTACAACG CGGAGAACAA TTTCGTATCG TTCATCAAGG TCGCCGGTGG ACACACGTGC
GGCTTCGCAG GTGATAATGG CCAAGCCACC AATGCTGAGA TCGGCAACAA GATCGGGCAG
ATTGCTTTCG ATGCTGCCGG GAACCTGTAC TTCACCGATA AGGCGAACAA TCGCGTGCGC
CGCATTGACT ACACCAGCGG CATCATCCGC ACGATTGCCG GCAATGGCAT TGCGGGGTAT
ATCGGCGATA CCGCCGGAGC GACAACCGCT GAGTTGGCCA ACCCGACTGG CGTAGGCGTT
GATTCGGAGG GGCAGGTGTT CATCATTGCG GGGGACGCGG CCAGCAGCAC AACGCAAGTT
GTGCGTCGAG TGACCACGTT CGGCAAACTG GTGCTGCCGA CGACGAAGAA CGGCGTGAAG
AGCGCTGCTT CGACGGTCCT GGTTTCGAAT ACCGGCAACT CTGCGATGCA ACTCACAAAC
GCCAAGTTCA CGGGGACGAA TCCCAACGAC TTCGCGGTCG ATCCCAACAC CACGACCTGC
TTGCTGACAC CGGGCAGCGT GCTCGCCGCG GGGCAGAGTT GCCAGGTCGG CTTCATCTTC
CAGCCGACCG GAACAGGTTC ACGCTCGGCG TACTTCAACC TGCTCAGCAA CACGTTACTG
GGCATCAACA ACGTGACGCT CAGCGGCGCG GCGACCACGG CCCCGGCGAT CCGGTTCACC
GCGCCGACGA GCGCCAGCTT GCTTCTGGCC AATGCAAAAG TCGGCATGAA AGTCAGTGTG
ACGTCGGATG CTTCCACGGC TCCGACCGGC ACGGTGACTT TCAAGGTTGA CGGTAAGCAG
ATCGGAGGGA CGGTTGCACT GGCCGGCGGA AGCGCTTCTG CGTTGCAGAC CAGTTTGTCT
GCGGGATCGC ACACGCTCTC GGTGTCGTAC AGTGGCGACC GGTACACAGC CTCGGGTACG
GTGAGTGAGA CGGTCACGGT AAAAACCGCG GCGACGTCCA ACTAA
|
|---|
| Protein sequence | MFVPTRQNSL LPWKCLLFAG FAAWLASMSA FAQTKPSAVT ITKPATSATM LSELPASEKA
ILAQAPENFY EFGAAKLGEV TGPQRFTVQF AQTATITKIT SSADFKVESD STCGEGRTYS
AGTDCILMVR FVPQGPGHRA GKLQVSHSAS VLPMGFGIGG YGYAPVISFV PSIITTVPAT
VSAGVGLLNG AQNLALAGDT LLIADTGNGK VLSIDSTGTS KALATGYTGV YGVAQDTFGQ
IYYDVPSTGK MYEIYDYGPV VQVSGTGTIA CPASTPCTLS SEALGTPGAM SIDPYNHLFF
VDSHQGAAFS TVQPIPANLI FLYDPFPYQQ SPSATMAVDS SDNLYSLWAN GSVCEIAQQS
LYNAENNFVS FIKVAGGHTC GFAGDNGQAT NAEIGNKIGQ IAFDAAGNLY FTDKANNRVR
RIDYTSGIIR TIAGNGIAGY IGDTAGATTA ELANPTGVGV DSEGQVFIIA GDAASSTTQV
VRRVTTFGKL VLPTTKNGVK SAASTVLVSN TGNSAMQLTN AKFTGTNPND FAVDPNTTTC
LLTPGSVLAA GQSCQVGFIF QPTGTGSRSA YFNLLSNTLL GINNVTLSGA ATTAPAIRFT
APTSASLLLA NAKVGMKVSV TSDASTAPTG TVTFKVDGKQ IGGTVALAGG SASALQTSLS
AGSHTLSVSY SGDRYTASGT VSETVTVKTA ATSN
|
|---|
| |