Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3591 |
Symbol | |
ID | 4072813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4242658 |
End bp | 4245120 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637985614 |
Product | ABC efflux pump, inner membrane subunit |
Protein accession | YP_592666 |
Protein GI | 94970618 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.171313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.56936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTCT TTCGCGACCT GAAAATTGCC GTACGTTCGC TGGCGCGGGC GCGCGCCCTC TGGATCACCG TGGCGCTTAC GCTGGCGCTG GGCATTGGCG CCAACTCCGC GATTTTCAGC ATTGTGCGCG CGGTGTTGCT GCGCCCGCTG AACAATCGCG ATGAAGACCG TTTGCTGTAC GTGCGGCAGA GCGCCTCCGG CCTCGGTCAA ACCGAGACGA ACTGGTCCAT CCCCGAGATT GATGACATCA GCAAAAACCT CAAGTCGATC TCCGAGATCG GGACGTTCTC CCAGGTGGCC TTTACCGTGG TTGGCCTCGG AACGCCGCGT GAAATCCCTG CTGGCGTGGT GGATGGCCAC TACTTTGAAA CCGTCGGCTT GCACCCCGTG CTGGGACGCT TGATTGGACC GCAGGATGAT GGACAGAATG CGGCCGGCGC AGTCGTGCTC ACGTACAAAT TCTGGACCGG TGCATTGCAC TCTGATCCCG GCGTGCTCGG GAAGCAGCTT CGGTTGGAGA GTTTTGCCGG CGCGCGGACC GGGACCGTTG TAGGTGTGCT CGAGCCGTCG GTGCCGTACC CGGTGGAGAC GGAAATCATC GCCAACCTGG TGACGAGCCC ACACCATCTC TCGGCGACGA TGGTGACCGG CCGCGAGCAC CGCATGACCG AAGTCTTCGC GCGACTCGCA CCGGGCGCAA CCCTTGAACA AGCGCGTGCC GAACTCCAGG CGGTGCACAC TGGGATGCTG AAAGCGCATC CGGAGGTCTA TCGTCCGGAG CATAACTACC AGATCACCGC GACGCGGCTG CATGACCAGA TCAACTCGCG CGCCAACACG GTGCTGTGGG TTCTGTTCGC GGCGGCTGCG CTGCTGTTCA TCATCGCGTG CTCGAACGTG GCGAACCTGG TTTTCGCGCG CACGGTCCGG CGCGAGGGCG AGCTTGCCAT GCGCACCGCG TTGGGCGCGA GTCGCGGTCA GTTGCGTCGC GCGTTACTGG CGGAGAGCGT GGTGTTGTGC TTCAGCGGGG TGATCGCCGC AATGCTGGTC GCTGCGCCGA TGGTCAGCAT TCTCGGCCGT TATGCCGCGC GTTTCTCGGT GCGCGCCGAC GGCCTCAAAC TCGATATGAG TTTCGTGTGG TTCGGGATTG CGCTGGCGAT CGCGGCTTCG ATTTTCCTCG CGTTCATTCC GCGCCTTCCT GCGGCGCAGG TTTCGCGCAG TCTGAGCGCG GCGGGCGTGG GCACGCGGGT TACGGGCGCC AACGGCCGAC GGTTGCGGAT TTTTGCGGTG ACGCAGATTG CCGCGTCGTT CCTGCTGCTT GCGGGCGCGG GCGTGTTGAT GCGGACGCTA TATGAACTGG AGAGCACGCG TCCGCCGTAC AACTCGGCGA ATGTACTTGC GGTGAATCTG CCGCCGATCG CCTACGGACG CACGCCGGAA CAGATCCAGA ACTTCGATCG CGATGTAAAG GCGCGCGTGG CAGCGCTACC CGGCGTGGAG AGCGTGGCCA GTGGCTTCAG CACCCCGTGG CGCGATGCGC AGGGACTGAG CATTGCGTTC CAGTTTGCGG TAGAAGGTGT GGCGAAGAAG AACGGCGTGG ACGATCCGCG CGCCAAGTTC CGCTCGATCT CGCCAAATTT CTTCAATACG CTCGGCATGC CCATTATCGA GGGACGCGAT TTCCGCGACA CCGACAAAGC CGGTGCGGAA CGCGTGGTGA TCATCAGCCA GAGCCTGGCG AAAAACCTGT TTCCCGGGCA GGAAGCGATT GGCCGCGAAA TCCGCTGGAC GGACAGCGTG ATGAAGTTCA TCGGCATCAG CTACGAGCCG CGGCGCATTG TGGGCGTGGT GCCCGATGTG GACGATGAGA ACATCATTCC CGCGCCGGCG ATGACGATTT ATCAGCCGGT GGCGCAGGAG TGGGTGGCGG CACGTCTGTT CGTGCGTGCT AAGGGCGATC CCTACTCGCT GGTTCCTGCG ATCACGCGTT CCATCCACGA GATGGACGGG AACCAGCCGG TGGAGCGGGC GGCGACGCTC AACGATATCC GCGCTGAAGT GCTCACCCCC GACCGTTTGA ACGCGATTGT CTTCGGCGGC TTCGCGGCGA TCGCGCTGCT GATCTCGGTG GTGGGCGTGG CGGGCGTGCT GGCGTTCTCA GTGAGTGGAC GCACCCGCGA ATTCGGCATC CGCATTGCGA TGGGCGCGCA ACCGCGCGAC ATTCTCGGCG GGGTTCTACG CGAAGGTGTG ATTATGGCGG GAATCGGCGT GGCGGCGGGC GTCGTCGTGG GATTCGCCGC GATGAAGGCC GTCCTGCGCT TCGTTTCCCA ATTGCACATG CCGAGCATCC TGACGTTGCT CGCGGCGGCG CTGGTGATTG TGGCGGCAGC GGTGATCGCA TCGGCAATAC CGGCAATGCG CGCGGCGCGA GTGAATGCGG TGGAAGCACT GCGGTCGGAG TAG
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Protein sequence | MSFFRDLKIA VRSLARARAL WITVALTLAL GIGANSAIFS IVRAVLLRPL NNRDEDRLLY VRQSASGLGQ TETNWSIPEI DDISKNLKSI SEIGTFSQVA FTVVGLGTPR EIPAGVVDGH YFETVGLHPV LGRLIGPQDD GQNAAGAVVL TYKFWTGALH SDPGVLGKQL RLESFAGART GTVVGVLEPS VPYPVETEII ANLVTSPHHL SATMVTGREH RMTEVFARLA PGATLEQARA ELQAVHTGML KAHPEVYRPE HNYQITATRL HDQINSRANT VLWVLFAAAA LLFIIACSNV ANLVFARTVR REGELAMRTA LGASRGQLRR ALLAESVVLC FSGVIAAMLV AAPMVSILGR YAARFSVRAD GLKLDMSFVW FGIALAIAAS IFLAFIPRLP AAQVSRSLSA AGVGTRVTGA NGRRLRIFAV TQIAASFLLL AGAGVLMRTL YELESTRPPY NSANVLAVNL PPIAYGRTPE QIQNFDRDVK ARVAALPGVE SVASGFSTPW RDAQGLSIAF QFAVEGVAKK NGVDDPRAKF RSISPNFFNT LGMPIIEGRD FRDTDKAGAE RVVIISQSLA KNLFPGQEAI GREIRWTDSV MKFIGISYEP RRIVGVVPDV DDENIIPAPA MTIYQPVAQE WVAARLFVRA KGDPYSLVPA ITRSIHEMDG NQPVERAATL NDIRAEVLTP DRLNAIVFGG FAAIALLISV VGVAGVLAFS VSGRTREFGI RIAMGAQPRD ILGGVLREGV IMAGIGVAAG VVVGFAAMKA VLRFVSQLHM PSILTLLAAA LVIVAAAVIA SAIPAMRAAR VNAVEALRSE
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