Gene Acid345_3587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3587 
Symbol 
ID4072809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4239149 
End bp4239466 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content58% 
IMG OID637985610 
ProductXRE family transcriptional regulator 
Protein accessionYP_592662 
Protein GI94970614 
COG category[S] Function unknown 
COG ID[COG5606] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.400871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.443277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC GAAACCTCGA CTACACCGTC AGTTCCGGAA ACATCTTCGC CGACCTCGGC 
CTTCCTAACT CCGAAGAACT GCTTGCCAAG GCCGAACTTG CGAACAAGAT CTCGACTCTC
GTCGGTAAGC GAGATCTCAC CCAAGCCCAA ACCGCCAAAC TTCTTGGCAT AGACCAACCG
AAAGTCTCCG CCTTGCTCCG AGGCAAGCTC TCCGGCTTTT CCATCGAGCG CCTGCTGCGC
TTCCTGCTTT TGCTCGGCCA CGACGTAAAG ATCACCGTCC AACCCGCGCG CGGCCGCGCC
CGTGTACGTG TCGCTTAA
 
Protein sequence
MAKRNLDYTV SSGNIFADLG LPNSEELLAK AELANKISTL VGKRDLTQAQ TAKLLGIDQP 
KVSALLRGKL SGFSIERLLR FLLLLGHDVK ITVQPARGRA RVRVA