| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3556 |
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| Symbol | |
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| ID | 4069288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4206526 |
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| End bp | 4207401 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637985579 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_592631 |
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| Protein GI | 94970583 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.276509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGTT ACCATCGAGC GGACGTGTTG CGCATCCTGC ATATCTCGGC CAAGCAACTG
ATTGGCTGGG AAAAGGCGGG CTTGCTTGCT TCGTCCGAGA TGTATTCCTT CTTCGATCTC
CTTCAAGTGA AAAAAGTTCG GGACCTGCGG GCGCAAAAAG TGCGCCCGAC GGCGATTCGC
GAATCACTGC AGGCCATGCA GAAGCAGGTG GCTGGGTTGG AGAATCCGCT GCTGGAGGCG
TCGGCGATCA CGGTGCGCGG AAGAGTCGCG TTCCGGCATG AAGGCATGTC GATGGATCCC
ATCGGCGGGC AGTACATGAT GGAGTTTGCG CCGGTCGGGC AACTGGTATC GGCCAACGTG
CGGCGCATGT ATTCGGCGCA GACCGCGAGC GAATTCTTTG CGCGCGGCGT GGCGCTGGAA
GAAGATCCGA ACAGCCAGGA CGAAGCGATC GCGGCCTATA TGAAGGTCCT GGAAATTGAG
CCGAACCATG CGGCGGCGCA CATCAACCTC GGCACGGTGT ATTACAACCG CGGCGAATTC
GATGATGCCG AGATGCACTA CCGCAAGGCC GTCGAAATCG ATTCGCGTTA CGCGCTGGCA
TACTTCGATC TCGGCAACGT TCTCGATGAA ACCGGACGTT TGGACGAAGC CGTGCGGGCG
TATCGGACTG CGATTATTCT TGCGCCCACT TACGCGGACG CGCATTACAA CCTGGCGCTT
GCCTTTGAGA AGTTGAAGAT GCCGCGCAAG GCGCTCAAGC ATTGGCGCAC CTATACCAAG
CTGGACGCCA ATGGGCCGTG GGCCATCCAC GCGCGCAAAC AGATTGCGCG GACGCTGGAG
AATGATCGGT TGAAGGTTGT GTATCGCAGC CAGTAG
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| Protein sequence | MHRYHRADVL RILHISAKQL IGWEKAGLLA SSEMYSFFDL LQVKKVRDLR AQKVRPTAIR
ESLQAMQKQV AGLENPLLEA SAITVRGRVA FRHEGMSMDP IGGQYMMEFA PVGQLVSANV
RRMYSAQTAS EFFARGVALE EDPNSQDEAI AAYMKVLEIE PNHAAAHINL GTVYYNRGEF
DDAEMHYRKA VEIDSRYALA YFDLGNVLDE TGRLDEAVRA YRTAIILAPT YADAHYNLAL
AFEKLKMPRK ALKHWRTYTK LDANGPWAIH ARKQIARTLE NDRLKVVYRS Q
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