| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3541 |
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| Symbol | |
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| ID | 4069273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4187646 |
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| End bp | 4189580 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637985564 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_592616 |
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| Protein GI | 94970568 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.133366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGATT CCCTCAGCGC AGACATCAAC TCGGCCCTCA AGCACTACTT CGGCTACGAC
CGCTTCCGCC CGCTGCAGGA ACGGATCATC CGCAGCATCG TCGCCAATAA AGACGTCTGC
GTCATTATGC CGACGGGCGG CGGAAAGTCG CTCTGCTACC AGCTTCCGGC GGCGATCTCG
CAAAAGACTA CGGTCGTCAT CTCCCCGCTC ATCGCGCTTA TGAACGATCA GGTCGTCCAA
CTCACGCAGA TGGGCATTCC CGCCGCGTTG TTGAACAGCA GCTTGCCGTA TGACGAACAG
AAGAAGGTGA TGCGCGCCGC CCGCGAGGGC AAGTACCGCT TGTTGTATCT CTCGCCCGAG
CGCCTGGTGC GCGAAGACAC TGTCGGATGG CTGCGCACCG TGCCGCTCGG CGTGTTTGCT
ATCGACGAGG CGCACTGCAT CTCCGAGTGG GGACACGAGT TTCGACCCGA GTATCGGCAA
CTCAAGCTAC TGCGCAACAG TTTTCCCGAC GTCCCCATCG CGGCCTTCAC CGCCAGCGCC
ACGCAGCGCG TGCGTCACGA CATCGTCCAT CAACTTGCGC TGCGCGAGCC CGACAAATAC
ATCGCCAGCT TCCATCGCCC CAACCTGCGC TACATCATTC GCCAGACCGA CCCCTACGGC
CAGCGCGACA TGCTGCTCCG CGCGCTGCGC AGCTACGCCG GCCACAACGT CATCGTCTAT
GCGCCGACGA TCAAAATGGT GGAAGAGGTC GCCGACTTTC TAATCGACAA GAAGATCCCC
GCCGTCCCCT ACCACGGACA GATGGATTCG GCGCTGCGCA CCAGGAACCA GGAGAAGTGG
ATGACCGACG AGGTGCGCGT GCTCGTCGGA ACCATTGCGT TCGGCTTGGG AATCAACAAG
CCTGCGGTGC GCGCGGTCAT TCACCTGGCA GTTCCGAAGT CGCTGGAGAA CTATTACCAG
GAAGCGGGCC GCGCCGGACG CGACGGCCTC CCCGCCGATT GCGTGATGCT CTGGCAGCCC
AAAGACCTCG GCTTGCTCGT GTACTTCATC CAGCAAATGC AGGACACCAG CGAGAAGAAG
CGAGCCTGGG AGCGCTACCA GGTCATCAGC GAATTCGTGA AGTCGGACGA GTGCCGCCAC
AAGCAGATCT GCGAACACTT CGGCGAGAAA AAGAGTTTCG ACGACTGCGT GGCATGCGAC
ATCTGCGGCG CAACCGTCGG CTGGATGACC GCTCCGGTCC CCGAGCCCAT GCCCGGCGAT
CCGCCAATCA AGCTGGGACT GCCGGAAGGG AAAAAGCCGA AGAAGAAACT TCGCGCGCCG
CAACCCTCGG AAATCGAGCA CGCCATGCCG CTCGACGATG CGCTGCTCGA CTTCTTCCGC
CTGTGGCGAC GCGACGAAGC CAAGCGCCGC GGTGTTCCGG CCTACGTGGT CATGCACGAT
ACATCGCTTG AACACCTCTG CCGGGTAAAA CCGAAGACGC TGGAACAAGT GCGAAGCATC
TCCGGCTTCG GCGACTTAAA GACCGCCGAT TACGGCCCGG GCATCCTGAA AGCCCTCGCC
GAATTCGACG CCGGCAAGCG CGCCCTCCAG GATTTGGCTC CGCGCCTCGA ACCGACCGGC
CCCAGCCCTT CACACGAAAC GCTGGACCTC CTCCGCAAAG GCCATTCCTT CGCCGAGATC
GCCAACATCC GCGGCCGCCA GTTGCAAACG GTCATGGCCG CCGTAGCGAA CCTAGTCGAG
ACCGGCGATA TCGAGTTCGA TCCCAAGTGG GTGAAAGAAG ATCGTCGGCT CGCGATTGAA
AACGCATGTG AGAAAGTCGG GACGGCGCGG CTGAAACCGG TGAAGGATTT AGTGGCGGCC
GAGGTGACGC TGGGGGAAGT GCATTTGGTG GTGGCTAAGA AGAGGTGGGA AGAGAAGAGA
AGAGACAAGG AGTAG
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| Protein sequence | MTDSLSADIN SALKHYFGYD RFRPLQERII RSIVANKDVC VIMPTGGGKS LCYQLPAAIS
QKTTVVISPL IALMNDQVVQ LTQMGIPAAL LNSSLPYDEQ KKVMRAAREG KYRLLYLSPE
RLVREDTVGW LRTVPLGVFA IDEAHCISEW GHEFRPEYRQ LKLLRNSFPD VPIAAFTASA
TQRVRHDIVH QLALREPDKY IASFHRPNLR YIIRQTDPYG QRDMLLRALR SYAGHNVIVY
APTIKMVEEV ADFLIDKKIP AVPYHGQMDS ALRTRNQEKW MTDEVRVLVG TIAFGLGINK
PAVRAVIHLA VPKSLENYYQ EAGRAGRDGL PADCVMLWQP KDLGLLVYFI QQMQDTSEKK
RAWERYQVIS EFVKSDECRH KQICEHFGEK KSFDDCVACD ICGATVGWMT APVPEPMPGD
PPIKLGLPEG KKPKKKLRAP QPSEIEHAMP LDDALLDFFR LWRRDEAKRR GVPAYVVMHD
TSLEHLCRVK PKTLEQVRSI SGFGDLKTAD YGPGILKALA EFDAGKRALQ DLAPRLEPTG
PSPSHETLDL LRKGHSFAEI ANIRGRQLQT VMAAVANLVE TGDIEFDPKW VKEDRRLAIE
NACEKVGTAR LKPVKDLVAA EVTLGEVHLV VAKKRWEEKR RDKE
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