| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3529 |
|---|
| Symbol | |
|---|
| ID | 4072788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4175422 |
|---|
| End bp | 4176210 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637985552 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_592604 |
|---|
| Protein GI | 94970556 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1912] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.879853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCGCT TCATTACCCT GACAACAGAC TTCGGCGTCA GCGACTACTA CGTTGGCGCG
ATGAAGGGCG TCATTTACAA CATCAATCCG TCGGCCACCG TGGTGGACAT TTCGCACTCG
GTGCAGTCGT ACGACTTGCT GGATGGCGCG CTGACGATCG CGCAGGCGTA TTCCTATTGG
CCAAAGGACA CGATCCACGT CGTGGTTGTG GATCCGGGCG TGGGAACCAG CCGGCGGCCG
ATCCTGGTGA GCGCGGGGAC ACATTTCTTC GTGGCGCCGG ACAACGGCGT GCTTTCGCTC
GTCTATGACC GCGAAGAACG CATCACGGCG CGACATATCA CCTCGTCGCA CTACTTCGTG
CAGCCTGTGA GCCAAACCTT CCATGGCCGC GACGTGTTCG CACCGGTAGC GGCGTGGATG
AGCAAAGGCG TGGAGCCGAT TAAATTCGGC GAGGCCGTCG ACGATTATCT CCGCTTCGCG
GCGCCCCGTG CCAAGGCCGG CGAAGGCAAC GAGGTTCGCG GGATCGTGCT TAAGGTGGAC
AAGTTCGGCA GCCTCATCAC CAATCTCATG CCCGCTGACG TCGGCGGGAT TTTTGGCGGC
GAGTTCCAGA TCAAGGTGGG CAACGCGACG GTCACGAAGC TGCTTTCGAA TTACGCGGAA
GGCGCCAAGG GCGAGGCGTT CGCGATCATC GGCAGCGGCG GGTTTATAGA AATTTCCGTC
AATCGTGGAT CGGCAGCCCA AGCAGCGCAA GCGAATAAGG GAAGCGAAGT TGTGGTGAAG
TTCGGCTAG
|
|---|
| Protein sequence | MARFITLTTD FGVSDYYVGA MKGVIYNINP SATVVDISHS VQSYDLLDGA LTIAQAYSYW
PKDTIHVVVV DPGVGTSRRP ILVSAGTHFF VAPDNGVLSL VYDREERITA RHITSSHYFV
QPVSQTFHGR DVFAPVAAWM SKGVEPIKFG EAVDDYLRFA APRAKAGEGN EVRGIVLKVD
KFGSLITNLM PADVGGIFGG EFQIKVGNAT VTKLLSNYAE GAKGEAFAII GSGGFIEISV
NRGSAAQAAQ ANKGSEVVVK FG
|
|---|
| |