Gene Acid345_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3488 
Symbol 
ID4069064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4113431 
End bp4114504 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content60% 
IMG OID637985510 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_592563 
Protein GI94970515 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCGA TCCTCAGCCA ACTGCGGCGA CTGTTCCTCT ACCTGCTGGC ATGGGTCCCC 
TTCGCCGCGC TGCTCTACTA TCTCTTCGGC GCCGTCGGCG GCATGACGCG CGCCGAGGCC
GGCATTCTCG TCCCGGTTCT CTGCGTTATC TACGCCTTCG ACTGCCTCAC CGCCTGGTAC
ACCTGCAAGG CCACGCCGCT TGAGACGTCA AGCATTCAGC GCATCGGCAC TACGCACCTA
CTTGCCGCCA GCATCATGAG CTCGATATGG GTGCTGGTTG CGCAGGCCGT TGCGCGGCTG
ATGGCTTATT CACCGCGCTT TGCGGATGCG CCCCATCACG TCGCTCGTAT CGGCTCGATT
CTCTTCGCTA CCGGCGTCCT TCTTTATCTT CTCTCTGTCG GATTGCACTA CGTTCTGCTC
GCCTTACAAC GTTCGCAAGC CGCCGAGCAG CGCCTCAACG CCGCGAAAGT TCTCGCGCGC
GATGCCGAAC TCCGCGCCCT GAAGACGCAA ATCAACCCGC ACTTCCTCTT CAACAGCCTT
CATTCCATCA GTGCACTGAC GTCGATTGAT CCAGCGCGCG CACGCGACAT GTGCGTCGCC
CTTGCCGACT TTCTTCGCCT CACCCTAGGC ATGGGCGAGA AGACCGTTAT CCCGCTCGAC
GAAGAACTAT CGCTGCTCCG TAAATATCTC GCGGTCGAAA AAATCCGGTT CGGCGCACGC
CTGCAAATGC AGGAAGATGT CGCGCTGGAA ACCTTGTCAC TCACGGTTCC ACCGCTGTTG
TTGCAGCCGT TAATCGAGAA TGCCGTCAAC CACGGCATCG CCAATCTGCC GCAAGGCGGA
TGGATAAAGC TCGAAGTCAA TCGCGAACCG GAGCAGGACC TGCTGCACAT CAAGGTCGCA
AACAACTACG ATCCCGATAC GCCTCCGCGC CGACGCGGCG GTGTAGGCTT AGTCAACGTG
CGCCAGCGTA TGGAAGCTCG CTACGGCACC CGCGCACAAT TCGCTATCGA TAAGAAAGAC
GACACCTTTG AAGTCCAACT TATTCTCCCC GCCGAGGCAG GCGTACCCGC ATGA
 
Protein sequence
MHPILSQLRR LFLYLLAWVP FAALLYYLFG AVGGMTRAEA GILVPVLCVI YAFDCLTAWY 
TCKATPLETS SIQRIGTTHL LAASIMSSIW VLVAQAVARL MAYSPRFADA PHHVARIGSI
LFATGVLLYL LSVGLHYVLL ALQRSQAAEQ RLNAAKVLAR DAELRALKTQ INPHFLFNSL
HSISALTSID PARARDMCVA LADFLRLTLG MGEKTVIPLD EELSLLRKYL AVEKIRFGAR
LQMQEDVALE TLSLTVPPLL LQPLIENAVN HGIANLPQGG WIKLEVNREP EQDLLHIKVA
NNYDPDTPPR RRGGVGLVNV RQRMEARYGT RAQFAIDKKD DTFEVQLILP AEAGVPA