| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3482 |
|---|
| Symbol | |
|---|
| ID | 4069058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4107196 |
|---|
| End bp | 4107990 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637985504 |
|---|
| Product | OmpA/MotB family outer membrane protein |
|---|
| Protein accession | YP_592557 |
|---|
| Protein GI | 94970509 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.300073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCAG CAGCGCGGCC GATCATTATT AAGAAGAAGG GCGGGCACGG CGGCCATCAT
GGCGGCGCAT GGAAGGTGGC ATACGCGGAT TTCGTGACCG CAATGATGGC GTTGTTCATC
GTGTTGTGGC TGATGAACAC GAGTAAGCCG GTCAAAGAAG CGATCAGCGG ATACTTCAAG
GACCCGAGCG GAACGGCCAA GAAAACGGGG TCTGCACAGA GCGGGACTGG CGAGAACTTC
ACGATCACCA AAGACAACAT GCCAGAGCTG AAAGAGCAGT TGCAACGCGC GATCCGCAAG
ATGAACAACT TCGAACAATT GAAGAAACAG ATTGAGATCA CGGTGACGTC AGAGGGATTG
CGAATCGAAC TGCTGGAGTC AGCGGCAGGA ACGTTTTTCG ATAGTGGCAG CGCACGTCCC
AACGACAGCG GGAAAGAGTT GCTGGAAATG CTGGCGCACG AGTTGCAGAA CTTGCCGAAT
ACGATCTCAA TCGAAGGGCA TACGGACTCG AAACCGTTCG TGGGAAACGG GAGCTACAGC
AATTGGGAGC TTTCGGCTGA CCGCGCGAAT GCGGCGCGAA GACTGATGCA AGACAGCGGA
GTTCGTGGGA ACCAGGTGTC GCAGGTGCGC GGGTTCGCGG ACCAGAATCT GCGAAAGAAA
GATGCGCCGG AAGATCCATC GAACCGGAGG ATCACGATAT TGGTGCAGTA TCTGCCGAAG
GTGGAGGGGG AAAGCGAGGC TGCGAAAGCA GAGGGTGAGC ACGAACGCGC GGAGGAAAAG
CACGCCGAGC ATTGA
|
|---|
| Protein sequence | MSSAARPIII KKKGGHGGHH GGAWKVAYAD FVTAMMALFI VLWLMNTSKP VKEAISGYFK
DPSGTAKKTG SAQSGTGENF TITKDNMPEL KEQLQRAIRK MNNFEQLKKQ IEITVTSEGL
RIELLESAAG TFFDSGSARP NDSGKELLEM LAHELQNLPN TISIEGHTDS KPFVGNGSYS
NWELSADRAN AARRLMQDSG VRGNQVSQVR GFADQNLRKK DAPEDPSNRR ITILVQYLPK
VEGESEAAKA EGEHERAEEK HAEH
|
|---|
| |