| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3480 |
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| Symbol | |
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| ID | 4069056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4105366 |
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| End bp | 4106271 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637985502 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_592555 |
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| Protein GI | 94970507 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00742863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.98733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGACC TGCTGCAAGA CGGTGTGTTT CAGCGCGTGC TGAGCGAGTT GCTCGTGGGG
GTGTACTTCA CCGACCGGGA GCGCAGGATT GTGTTCTGGA ATGCGGGGGC GGAGCGGATC
ACGGGGTATC TGAGCCATGA GGTGATTGGG CGGATGTGCC GGGAGGAGAT CCTGATGCAT
TGCGACCATC AGCGGCGGAA TGTGTGCGTG TCGTGTTGTC CGCTGGCGGA GGCGATGCTG
GATGGGAAAG CGCGCGAGGC TTCGTTGTTT TTGCGACATA AGACGGGGCA TCGGGTGCCG
GTACGGATTC ACTCGATGCC GATCCGCGAT GCGAAGGGGA CGATTATCGG CGCAGCGGAA
TGTTTCCAGC GGCAGCATGA TGTGTGGCAT CCGGAGCGAC GGGATGCGAA TAACCGCGAC
AGTTACGCAG TGCGGGGAAT TCCGGACTAC AGCTTCATGG TGTCGGAGCT GAGGATGCGC
CTGGGGCGAT TCGAAGGAAG CGGCGCCGGA TTCGGCGTGC TGTGCCTGGA GGTGGACCGC
TTCGATTCGC TGAGGTCGAC ACGCGGACAC GAAGCGTGCG AGACGGTGCT GCACGTGATC
AGCAATACGC TGCAGAACAC GATCCGCCAG GGCGATTGTT TGGGAGCGTG GTCGGAGGCG
CGGTTGATGT TGTTGTTGAA TGCGGCGACA CCGGAAGCGG TGGTGCGGGC CGGAGAGCGG
ACACGAGGAC TGGTGAGTTG TTCGAACGTG ACGTGGTGGG GCGATCCAGT GCCGATCACG
ATTGCGTGCG GCGCGACGGT AGCGAAAACG CGCGACACGA TGGAGTCGAT CGTGCGGAGA
GCGGAGCGCG CGTTGGACGA AAGCCTGGCG GCTGGCGGCA ATCGCGTGAT GCTCATACAG
GAATAA
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| Protein sequence | MADLLQDGVF QRVLSELLVG VYFTDRERRI VFWNAGAERI TGYLSHEVIG RMCREEILMH
CDHQRRNVCV SCCPLAEAML DGKAREASLF LRHKTGHRVP VRIHSMPIRD AKGTIIGAAE
CFQRQHDVWH PERRDANNRD SYAVRGIPDY SFMVSELRMR LGRFEGSGAG FGVLCLEVDR
FDSLRSTRGH EACETVLHVI SNTLQNTIRQ GDCLGAWSEA RLMLLLNAAT PEAVVRAGER
TRGLVSCSNV TWWGDPVPIT IACGATVAKT RDTMESIVRR AERALDESLA AGGNRVMLIQ
E
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