Gene Acid345_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3472 
Symbol 
ID4069048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4097227 
End bp4097589 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content59% 
IMG OID637985494 
ProductPadR family transcriptional regulator 
Protein accessionYP_592547 
Protein GI94970499 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID[TIGR03433] transcriptional regulator, Acidobacterial, PadR-family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0715346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAATA ACGAGAACAG CACTTCGCGG GACCTGTTTC CGGGCGCACT GGAAATGATG 
ATCCTGGAAT CGCTTCGGCG TCAGCCGGCG CATGGATATG CGCTGGTCCA GCACATCCAG
CAGCGCTCGA ACAACCTGCT GCAGGTGGAA GAAGGGTCGC TGTATCCGGC CTTGCAGCGC
CTTCTCAAAG GGAAGCTGGT GAAGGCCGAG TGGACGGTTT CGTCTTCGAC CAATCGCCGG
GTCCGTGTTT ACGAGATCAC GAAAGCTGGA TTGCGCCACC TGGAGCGCGA GATCTCCAGC
TTCGACCGCA TGCTCGATGG CATTCAAATG GTGCTCGGAC CGGCTAAGCG CGAGGCCAAT
TAG
 
Protein sequence
MPNNENSTSR DLFPGALEMM ILESLRRQPA HGYALVQHIQ QRSNNLLQVE EGSLYPALQR 
LLKGKLVKAE WTVSSSTNRR VRVYEITKAG LRHLEREISS FDRMLDGIQM VLGPAKREAN