| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3471 |
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| Symbol | |
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| ID | 4069047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4094536 |
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| End bp | 4097217 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637985493 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_592546 |
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| Protein GI | 94970498 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.440617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.051369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTGGA TCGAGCGCAT CTTCCGCCGT CGGCGTCTTA GCGACGAATT GGCCGAAGAG
CTGCGGCTGC ACATTGAAGA GAAGACCGAG CAGCTCATGC GCCTGGACGG CCTCTCTCGA
AGCGAGGCGC GTGAGGCTGC GCTGCGCGCG TTCGGCAATC CGGTGCTGGT GGAGACACAG
AGCACCGAGG TCTGGCAGTG GCCGCGGCTT GAATCGCTGC TGGCTGACCT GAGACTCGCT
CTGCGGCGCT TGCGCAGGTC GCCGGGTTTT GCGACGACCG TGCTGCTGAC GCTGGCGGTC
GGCATCGGCG CAAATACTGC CGTCTTCAGC GTGATCAACC GGGTGCTGTT GCAACCGCTG
CCGTATCCGG AGGCCGATCA GCTTGTCTCG CTGCGGCTGA ACGCCCCGGG GGCAGCCGGT
CTCGCCGACT TCCAGAACGG CCTCCCCCTC TCCTCCTCGA TGTACTTCAC CTTCAGCGAG
AGCAACCGCA CCTTTCAGTC GCTGGGGACG TGGACCTCCG CCAGGGCCAA CGTGAGCGGG
GTGGCGCAGG CGGAGCAAGT GAATGTCGTG CTCGTGACCG ACGGAGTTCT CGAAGCACTC
GGGGTGCCTC CCCTGGCGGG CCGGGAACTG ACGGCGGCAG ACCAAGCGCC GAACGGCGCA
AAGAATGTGG TGCTCAGCTA TGGGTACTGG CAGCGGCGCT TCGGTGGCGA TCGTTCCGTT
ATCGGCCGCG CGATTGTTAT GGATTCGCAG GCGCGCACTA TTGTCGGGGT GATGCCGCGT
GGATTCCGCA TCGTGGACCA TGACTTCGAC GTGCTGGCGC CCTCGGCGTT CGAGCGCAAC
AAGCAATCGT TGGCCGGCTT TGGACTGCAG GGAATTGGGC GGCTCAAACC CGGAGTGACG
ATCGCGCAGG CCAACGCAGA CATCGCGCGC CTGGTGCCGG TGTGGATGGA CTCATTTTCA
AACGGCCCCG GATCGGACCC GCACTGGTAC GACGCGTGGA GGATCACGCC GGATTTTCAT
TCCTTGAAAC AGGAAGTGGT TGGGAATGTG GGCAGCGTTC TTTGGGTGGT GATGGGCACG
ATTGGAATCG TGCTGTTGAT TGCCTGCGTG AATGTGGCCA ATCTGCTGCT GGTTCGCGCC
GAGGCGCGGC AGCTCGAACT CTCGATCCGC GCAGCCCTGG GCGCCGGACG GGGACGGATC
GCGCGCGAGC TGCTTTTTGA AAGTTCGCTG CTCGGTCTGC TCGGCGGGAT CATGGGAATC
GGCGTGGCTT TGGCAGGCTT GCGCTTGCTG GTTTCAATTG GCCCCGCGAA CCTGCCGCGA
CTGACTGAGA TCACTCTCGA TGCACGCTCG CTTCTCTTTG CATTCGTTCT GTCACTCTTA
TCGGGACTGT TCTTCGGATC GATTCCGGCG TGGAAATACA CACGGTATCG TGGCAATGTG
AGTCTTGGCG CCACACGCAC GGTGAGCGCG AGCCGCGAGC GGCATAGGTC GCGCAACATT
CTCATCGTCG CCCAGGTCGC GATGGCGGTT GTACTGCTGG TTTGCGCGAC GCTGATGATC
CGCACCTTCC GTGAACTGTC GGCGGTTGAT CCGGGATTTA CGGATGCCCC TACGCTGCAA
ACCCTGCGCA TCGCGATCCC CGAGTCGTCC ATCGCGGATC CGCAGATGGT CGCGCGCGTC
GAGAACAACA TTGCGGACAA ACTCGCCTCG CTTCCCGGCG TGAGCGACGT GGGGTTTGCC
CTGCTCGTCC CGATGGAAGA TGCCCAGCAT GGTTGGAACG CGATTCGCGC GGAAGGGAAA
ACCTATGCAG GAGATCCGCC ACTCCGCTTC TATAACTACA TCTCTCCGGG ATACTTTCAG
ACTATCGGCA CACATCTAGT TGCGGGCCGC GATATTACCT GGAAAGAAAT CTACGACGTT
GCGCCACGCG CGATCGTTTC TGAGAATCTT GCCCGCGAAG AATGGGGCAG CGCTGCCAAT
GCTATTGGAA AACGCTTTCG GGAAGCGCCA TCGGAGCCGT GGAGTGAGGT GATTGGCGTT
GCGGAGAACG TGCACTACAA CGGCGTGAAT GAAAGAGCAC CGGCGATCGT GTACTGGCCG
GCGATTATCC GCAATCCCTG GCTCGGAACC TTTACGCCAC GCTCGGTCGC GTTCGTGATC
CGTAGCAAGC GCGCAGGAAC GGAAGCGCTC GTCAACGAGA TCCAGCAGTC GGTCCGGAGC
GTCAACGCTG ACCTGCCTGT GGCCGCGCCT CGCACCATGC AGGAGATCTA CTCGAAGTCG
CTGGCGCGCA CTTCCTTCAC CCTCGCGATG TTGGGAGTTG CCGCCGCAAT GGCGCTGGCA
CTCGGCATCA TCGGCATCTA TGGGGTGATT TCCTATTCGG TATCGCAACG CACGCGGGAG
ATCGGCATCC GCATGGCGCT CGGCGCCCAG AAATTGGAGC TGCGATGGAT GCTGGTGCGG
AGCGCTTTAG TCCTCACGGG GATAGGCATC GTGATCGGAC TAGGGGCGGC GGCTGGCGTC
GCGCGGCTGC TGACGACCCT GCTGTACGGC GTCAGCCCGC TGGATCCCTT TAGTTTCGCC
GCGGTCCCAT TGATCCTCTT TGCGGCAGCG ACGCTGGCAA GCTTTCTGCC GGCTTCGCGG
GTTGCCGTCA TCAATCCTGT GGATGCGCTA AAGGCGGAAT GA
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| Protein sequence | MGWIERIFRR RRLSDELAEE LRLHIEEKTE QLMRLDGLSR SEAREAALRA FGNPVLVETQ
STEVWQWPRL ESLLADLRLA LRRLRRSPGF ATTVLLTLAV GIGANTAVFS VINRVLLQPL
PYPEADQLVS LRLNAPGAAG LADFQNGLPL SSSMYFTFSE SNRTFQSLGT WTSARANVSG
VAQAEQVNVV LVTDGVLEAL GVPPLAGREL TAADQAPNGA KNVVLSYGYW QRRFGGDRSV
IGRAIVMDSQ ARTIVGVMPR GFRIVDHDFD VLAPSAFERN KQSLAGFGLQ GIGRLKPGVT
IAQANADIAR LVPVWMDSFS NGPGSDPHWY DAWRITPDFH SLKQEVVGNV GSVLWVVMGT
IGIVLLIACV NVANLLLVRA EARQLELSIR AALGAGRGRI ARELLFESSL LGLLGGIMGI
GVALAGLRLL VSIGPANLPR LTEITLDARS LLFAFVLSLL SGLFFGSIPA WKYTRYRGNV
SLGATRTVSA SRERHRSRNI LIVAQVAMAV VLLVCATLMI RTFRELSAVD PGFTDAPTLQ
TLRIAIPESS IADPQMVARV ENNIADKLAS LPGVSDVGFA LLVPMEDAQH GWNAIRAEGK
TYAGDPPLRF YNYISPGYFQ TIGTHLVAGR DITWKEIYDV APRAIVSENL AREEWGSAAN
AIGKRFREAP SEPWSEVIGV AENVHYNGVN ERAPAIVYWP AIIRNPWLGT FTPRSVAFVI
RSKRAGTEAL VNEIQQSVRS VNADLPVAAP RTMQEIYSKS LARTSFTLAM LGVAAAMALA
LGIIGIYGVI SYSVSQRTRE IGIRMALGAQ KLELRWMLVR SALVLTGIGI VIGLGAAAGV
ARLLTTLLYG VSPLDPFSFA AVPLILFAAA TLASFLPASR VAVINPVDAL KAE
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