| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3461 |
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| Symbol | |
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| ID | 4069037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4082675 |
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| End bp | 4085434 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637985483 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_592536 |
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| Protein GI | 94970488 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00119144 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00373054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAGCCT TACGGCACGG GTGGGCGCGT ATTCGCAATT TTGCTTTCGG GCGATCGAAC
CGCGAGCGTT TGCGTGAAGA GATGGAAGAG CACGTCGCGC TGCAGACCGA AGAGAACATC
CGCTCGGGCA TGTCGGCGGT CGAGGCGCGC CGCCAGGCGC TCATCAAACT CGGGCCGGTG
GAGGCGGTTG GCGAAAGTTA TCACGCCGAA GAGAGTCTGC CGATCCTGGA GACGGTGTTG
CAGGACTGCC GCTATGGCGT GCGCATGCTG AAAAAGTCGC CGGTATTCAG CAGCGTCGCG
GTCTTGACGC TCGCGCTGGG CATTGGCGCG AATGCGGCGA TCTTCACCCT GGTACACGCA
TTGATGCTCA AGAAGCTGCC GGTGGCCGAT CCGAAGTCGC TAGTGAGGCT CGGCAACAAC
AACGACTGTT GCGTAGGAGC GGGTTTTCAC GACAGTGGTG AAGTCTCGCT CTTCACCACG
AGTAGTTATG AGTTTCTGAA AAAGAACACC ACGGAGTTTG AAGAACTGGC GGCGATCCAG
GCGGGATTCG CCTATCGCCC AGTCGTCGTG CGGCGCGAGG GCGCGCAGCA GACGCCACGT
TCGGTGATGG GCGAATTCGT ATCCGGCAAC TACTTCAAGA CCTTTGGCCT GACTCCCGTC
GCAGGAAGGC TGCTGGAAGA TTCAGACGAT GTGATCGGCG CGCCGATGAC CGCGGTGATG
AGCTACGAGA CCTGGAAGAA CGCATTCGAT CGTGATCCGT CGGTAGTGGG CAGCACCATG
TACGTGAACA CGAAGCCGGT GACGGTCGTG GGCATCGCGC CGGAGAACTT CTATGGCGAT
CGTTTGTTGA GCACGCCACC GGAATTCTAC CTGCCAATCG AGACCATGCC GCCGATTGCG
AATGCTCCGT ATGTACACGG GTCGGAAATG CAGTGGCTGT ACATCATCGG ACGGCTGAAA
CCGGGCGTTT CGCGCGCGGT TCTGGAGCAG AAAATCAGCG AGTTGCTGCG CGAACAACTC
GTCACCACGC AGCGTTTTTC ATCGAAGGAA GGGCGGGAGC GGCTCAGGAA AGCGCACATC
GTGCTTTCCC CGGCGGGCGG CGGCATCCAG GCCCTGCAGC AGCAATACGA CAAGCACCTC
AAACTCCTGA TGTGGGTATC GGGCCTGGTG CTGCTGATTG CGTGCGCGAA CATCGCGAAC
TTGCTGCTAG TGCGCGGCAT GGCACGTAAG GCGGAGATCA ATGTGCGCAC CGCTCTTGGC
GCAAAGCGTG GACGCATCGT GCGGCAGCTT CTAACTGAGA GTGTTCTGCT TGCTGGAATT
GGTGGAGGAG CGGGACTGCT GGTTGCGTAC GCCGGCACGC GCATGTTGCT GGTGCTGGCG
TTTCCCGGCG CGCAGCAGGT GCCCATTCAC GCCGCACCTT CGCCCGCGGT CCTTGCGTTC
GCGTTCGGAC TCTCGCTGCT CACTGGCGTG CTATTTGGAA TGGCGCCGGC TTGGATCGCG
GCGAAGTCCG AGCCGGTGGA AGCCCTGCAC CGCGGTACTC GTTCTGTGAT CGGCGGAGCC
ACGCTTCTGC AGCGCGGACT CGTGGTGATG CAGGCGGGAC TCTCGCTGGT GTTGCTGGTC
GGAGCGGGAC TTTTCGCGCA GAGCCTGAGC AAGCTGCAGC ACATTGACCT CAAGCTCGAT
GCCACCAACC GATACATCGT GCACATCAAT CCCCAAACGG CAGGGTACTC GCAGCGTCAG
GTCGGAGAAC TGTATCGTCT GCTTGAGGAA CGATTTCATC TCATCCCTGA AGTAGAGAAA
GTCGGCATCA CGAGCTATTC GCCGATGGAA GACAACAACG ATAGTTGGGA CGTGATGGTG
CAGGGCAAGC CGTACCCGCA CACTTTGTCT TCCGTGCTGC GCGTAAGTCC TGAGTACTTC
GACTCCGTCG GCACGCACCT GGTGATGGGA CGCGGCATTG GCGTGCAGGA CACCGAGACT
TCACCCACGG TGGCAGTGGT GAACCGTACC TTTGTGAATA AGCTCTTTCA GCCCGGCGAG
AACCCGATCG GACAACACTT CGGCGGCAGT GCGGCATCGG TGGCCGATTT TGAGATTGTC
GGCGTGGTCG AAGACACGGT GTATTCCGAT GCGCGTTGGA GAGACCATCT CATGTTCTTT
ATGCCGCTGC TGCAGCGCCC GGCGAGCGAT AAAGATCCGA TTGAAAGCGA CGAGAGCCTT
TTCGTGAGCG CCATCGTGCT CAAGACGTCG CGGCCCGTGC CGGAGATGGA AACGCTGGCG
CGCAAAACGT TGTCGGCAAT CAATCCGAAC CTGAGTGTGG TGAAATTCCA GACTTTTGAA
TCGCAGATTT ACGACCAGTT CGCCGAAGAC CGCATGGTTT CGCGGTTGAC GACGTTGTTC
GGCGCACTCG CGTTGCTGCT GGCGACGTTG GGACTCTACG GTGTGACCGC ATACGGCGTG
GCGCGGCGGA CGCCGGAGAT TGGGATCCGC ATGGCGCTCG GCGCGCATCG CGGTGGCGTG
ATGACAATGG TGGTGCGCGG CGCGATGGTT CAGGCGCTCA TTGGGCTGGC GATTGGCGTC
CCGGCGGCAC TGCTGTGCGC GCGCTTCGTT ACCTCGCAGC TCTACGAGGT GAAAGGCGTG
GATGCTCGCG TACTTGTGGG CGCAGTTCTC ACCTTGGGCG TGGCTGCTTC AATCGCGGCA
CTGATCCCGG CGCGACGTGC AGCGACCATC GATCCGGCGC GGGCGTTGAG AACGGAGTAG
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| Protein sequence | MKALRHGWAR IRNFAFGRSN RERLREEMEE HVALQTEENI RSGMSAVEAR RQALIKLGPV
EAVGESYHAE ESLPILETVL QDCRYGVRML KKSPVFSSVA VLTLALGIGA NAAIFTLVHA
LMLKKLPVAD PKSLVRLGNN NDCCVGAGFH DSGEVSLFTT SSYEFLKKNT TEFEELAAIQ
AGFAYRPVVV RREGAQQTPR SVMGEFVSGN YFKTFGLTPV AGRLLEDSDD VIGAPMTAVM
SYETWKNAFD RDPSVVGSTM YVNTKPVTVV GIAPENFYGD RLLSTPPEFY LPIETMPPIA
NAPYVHGSEM QWLYIIGRLK PGVSRAVLEQ KISELLREQL VTTQRFSSKE GRERLRKAHI
VLSPAGGGIQ ALQQQYDKHL KLLMWVSGLV LLIACANIAN LLLVRGMARK AEINVRTALG
AKRGRIVRQL LTESVLLAGI GGGAGLLVAY AGTRMLLVLA FPGAQQVPIH AAPSPAVLAF
AFGLSLLTGV LFGMAPAWIA AKSEPVEALH RGTRSVIGGA TLLQRGLVVM QAGLSLVLLV
GAGLFAQSLS KLQHIDLKLD ATNRYIVHIN PQTAGYSQRQ VGELYRLLEE RFHLIPEVEK
VGITSYSPME DNNDSWDVMV QGKPYPHTLS SVLRVSPEYF DSVGTHLVMG RGIGVQDTET
SPTVAVVNRT FVNKLFQPGE NPIGQHFGGS AASVADFEIV GVVEDTVYSD ARWRDHLMFF
MPLLQRPASD KDPIESDESL FVSAIVLKTS RPVPEMETLA RKTLSAINPN LSVVKFQTFE
SQIYDQFAED RMVSRLTTLF GALALLLATL GLYGVTAYGV ARRTPEIGIR MALGAHRGGV
MTMVVRGAMV QALIGLAIGV PAALLCARFV TSQLYEVKGV DARVLVGAVL TLGVAASIAA
LIPARRAATI DPARALRTE
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