| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3445 |
|---|
| Symbol | |
|---|
| ID | 4070329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4064944 |
|---|
| End bp | 4065819 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637985467 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_592520 |
|---|
| Protein GI | 94970472 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2107] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.378909 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTA GCAGTGTATC CGCGCACGTG CGCGAAATCG CCGTAGCGCA CAGTCCTGAT
TCGGACGACG CATTCATGTT CTATGGGCTC GCGACCAACA AGGTCCGCGT GCCTGGCTTG
AAATTCAACC ACACACTCAC GGACATCGAG ACCCTGAACC GCAAGGCGCT CGATGGTTTC
TACGACGTCA CGGCGATCTC GTTCCACGCC TATCCGTACC TGCAGGATAA GTACGCGCTG
ATGCCCAGCG GCGGTAGCGT CGGGGAAGGC TACGGGCCGA TGATCATCTC GACCAAGCAG
CTCACGCCGG AAGAGGCCTG CAAGACGAAG ATCGCGGTCC CGGGAACCAT GACCACCGCG
TACCTGGCGC TCAAGCTGTT CTCGCCGGAC GTCGAGACCG AAGTGGTGCC GTTCGACCAG
ATCATCCCGG CGGTGCTTGC GGGCAAGTAC GAAGCCGGCC TCATCATCCA TGAAGGCCAG
CTGACCTACA GCCGCAGCGG GCTGCATAAA GTCCTCGACA TGGGCAAGTG GTGGCGCGAC
CTCACCGGGC TGCCCCTGCC GTTGGGCGGC AACGCGATCA AGCGGACCCT CGGGCCGGAC
CTGATGCAGA GCGTTTGCGT GGCCCTGCGC GACAGCATTC AGTACGCGCT GGATAACCGC
GCTGAAGCGC TCGAGTACGC CATGCAGTTC GCACGCGACC TCGACGTGCA ATCGGCGGAC
AAGTTCGTCG GCATGTACGT GAACGAGCGT ACCCTCGATT ACGGTCCCGA CGGACGGGAT
GCTGTCTCCA AGCTGCTTGA TATGGGCTAT GAGAAGGGCA TCATCCCGAA CCGCGCCCAT
CCTGACTGGG TGGAACTCGC AGCGGCTGCA AAATAG
|
|---|
| Protein sequence | MSGSSVSAHV REIAVAHSPD SDDAFMFYGL ATNKVRVPGL KFNHTLTDIE TLNRKALDGF
YDVTAISFHA YPYLQDKYAL MPSGGSVGEG YGPMIISTKQ LTPEEACKTK IAVPGTMTTA
YLALKLFSPD VETEVVPFDQ IIPAVLAGKY EAGLIIHEGQ LTYSRSGLHK VLDMGKWWRD
LTGLPLPLGG NAIKRTLGPD LMQSVCVALR DSIQYALDNR AEALEYAMQF ARDLDVQSAD
KFVGMYVNER TLDYGPDGRD AVSKLLDMGY EKGIIPNRAH PDWVELAAAA K
|
|---|
| |