| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3439 |
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| Symbol | |
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| ID | 4070323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4057118 |
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| End bp | 4058872 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637985461 |
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| Product | serine phosphatase |
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| Protein accession | YP_592514 |
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| Protein GI | 94970466 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1956] GAF domain-containing protein
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTT CCCAACAACA TCCCTCCATA GACGCGTTTC TGCTGGAGGT GGCCGATGTC
GTCAACACGA CACTGGACCT CGACACGCTG CTTACGCGCG TGGCCGGATT GGTGCGCAAG
ATCATCAACT ACGACATCTT TGCCATCCTG CTGGTGAACG AAAAGGCGCA AGAACTGCGG
ATCCGCTTCC AGGTCGGGCA TCCGGCGGAG GCGATCGAGC GCACCCGGAT CAAGATTGGC
CAGGGTATTA CCGGAGCTGC GGCACAGACC CGCGAGCCGG TGCTGGTGAA TGACGTCTCC
AAGCACCCGG AATACATTAC CTCGGTCTCC GATGTACGCT CCGAACTGGC GATCCCGATG
ATCGTGAAGA ACAAGGTCAT CGGCGTAATC GACATCGAGG CGCCGCAGAA GAACTATTTC
ACCGAAGAGC ACAGCCGGTT GCTGACGGTG ATCGCCTCAC GCGTGGCGAT TGGCATCGAA
AACGCGCGGC TTTACACGCG GGTTTCGAAC CAGGCGAAGT CGCTGCTGCT GCTCAACGAG
ATCAGCCGCG AACTGACGTC GATTCTCAAC CTCGATCAGT TGTTGAAGCG GGTTGGCGAG
CTTCTTACGC GCGTGATTGA TTACCAGATG TTCTCCATCC TGCTGCTCGA CCCGATGGGC
GAGAAACTGC AACATCGCTT CTCACTGCGC TTCCAGGAGA ACATCCACCT CAAGCACGAT
ATCCCGCTGG GCCGCGGACT GGTGGGTTAT GCCGTCGGGA AGAACGAAGC TGTGCTCGTC
CCCGACGTCC GCAAAGATTC GCGTTACATC ATGCTGAATC CGGAGACGCG CTCTGAGCTG
GCGGTACCGC TGGTTTACAA GGGCAAAGTC ATCGGAGTCC TCGACCTTGA GCACACCAAG
CGCGGCTTCT TCACAGAAGA TCACAAGCGC ACGCTAACCA CGCTTGCCGC GCAGATCGCC
ATCGCGATTG AAAACGCCCG GCTCTACGAG CAGATCGTGA AACAGGAGCG GCGGCTCGAG
CAGGACATGG CGCTCGCCCG CGAGTTGCAG CATCACTTGC TTCCGGCGTC GCTACCGAAG
ATGACTCACG CTGAGGTCGC CGCCAAGTTC TCTCCCGCCC GCGCCATCGG CGGCGATCTC
TACGATTTTC TCCGGTACTC CGGCGGTTAT CTGCACGGCA TCGCGGTGGG CGACGTCAGC
GGAAAAGGAG CACCCGCGGC CATTTATGCC GCGCTGGCCA GCGGCATCCT GCGCTCACAT
TCGCAGGAAG AGCCGGGCGC CGCGGAGATG CTGAGCATCG TCAATTTATC GCTTTCCGAT
CGTCCCATTG ATGCGCAGTA CATCTCGCTG ATCTATGCCA TTTGGGATGA CTCGGCTCGG
ACTTTGCGAC TCGCGAACTC GGGACTACCG CGCCCCATGC ACTGCCGCAA GGGCAAGGTC
ACGCGCATTG ATGCGACCGG TCTGCCACTC GGGCTCTTCG CCAGCGCCGA GTATGAAGAG
ACTGCGATTC GCGCCGAAGC CGGCGACGTC TTCGTCTTCT TCTCCGACGG TATTCTCGAC
GCGCGCAACC GTGCAGGCGA ACTCTTCGGC AGTGGCCGCG TCGAAGGCCT GGTATGCGAG
TTTGCCGGCG AACCGGCCCA GAAGATTGTC GATTCGATCT ACAACGCCGT GTGCGATCAT
GCCGTCGGCG TGGAAACCTT CGACGACCAA ACCATTGTCG CGCTGAAAGT AAAAGCAGGA
AGGGCGCGCA AGTGA
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| Protein sequence | MKASQQHPSI DAFLLEVADV VNTTLDLDTL LTRVAGLVRK IINYDIFAIL LVNEKAQELR
IRFQVGHPAE AIERTRIKIG QGITGAAAQT REPVLVNDVS KHPEYITSVS DVRSELAIPM
IVKNKVIGVI DIEAPQKNYF TEEHSRLLTV IASRVAIGIE NARLYTRVSN QAKSLLLLNE
ISRELTSILN LDQLLKRVGE LLTRVIDYQM FSILLLDPMG EKLQHRFSLR FQENIHLKHD
IPLGRGLVGY AVGKNEAVLV PDVRKDSRYI MLNPETRSEL AVPLVYKGKV IGVLDLEHTK
RGFFTEDHKR TLTTLAAQIA IAIENARLYE QIVKQERRLE QDMALARELQ HHLLPASLPK
MTHAEVAAKF SPARAIGGDL YDFLRYSGGY LHGIAVGDVS GKGAPAAIYA ALASGILRSH
SQEEPGAAEM LSIVNLSLSD RPIDAQYISL IYAIWDDSAR TLRLANSGLP RPMHCRKGKV
TRIDATGLPL GLFASAEYEE TAIRAEAGDV FVFFSDGILD ARNRAGELFG SGRVEGLVCE
FAGEPAQKIV DSIYNAVCDH AVGVETFDDQ TIVALKVKAG RARK
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