Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3352 |
Symbol | |
ID | 4071270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3976319 |
End bp | 3977758 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637985374 |
Product | SSS family solute/sodium (Na+) symporter |
Protein accession | YP_592427 |
Protein GI | 94970379 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCTTCC GCAAGTCACA GCGCACCCTG AAAGATTATT TCCTCGCAGA CCGATCCATT CCCTGGTGGG CGCTGGCGCT CTCCATCGTC GCCGCCGAAA CCAGCACTCT GACCCTGGTC AGCGTCCCGG GTCTCGCTTA CGACACCAAC TTCACCTTCC TGCAACTCGC CTTCGGATAC CTCGTAGGGC GAGTCATCAT CTGCATCATC CTGCTCCCGC AATATTTCAA GGGATACCTG TTCACCGCCT ACCAACTCAT CCAGCGTCGC TTCGGCGGCA AGCTGCGCAC CTACACCGCT GGCCTCTTCC TCATCACCCG CGCCGCTGCC GAAGGCGTTC GCGTTTACGC TGTCGCGTTG GTGATCGGTA TCGCCCTCGG CCCGCAACTC GGTAATTTCA GCGACTTCAG CCGCGACCTG ATCGCCATCT CCATTGTCTG CATATTGACG CTCATCTATA CGTTCGAGGG AGGCCTCGCG GCGGTGATCT GGACCGACGT CATCCAGACC TTCATCTACA TCGGCGGGAC GATCGTCGGT TTCTTCACCA TCATCCATCT CGTCCCCGGC GGCTGGGGCG CGATTCACGC CACTGCCGCG GCGGCAGGGA AGTTCAGGGT CTTCGACTTC AGCTGGGATT TCTGGAAGAC CTACACCTTC TGGTCCGGCG TAATCGGTGG CGCGTTCCTG ACGACCGCGA GTCACGGCAC CGATCAACTC ATCGTGCAGC GACTATTAGC GGCGCGCAGC CTGAAGGATT CACGCTGGGC GCTGCTGGCG AGCGGCGTGG CTGTGCTTCT CCAGTTCGCG CTGTTCCTCT GCGTCGGCGC GATGCTCTGG GTCTTCTACC ACGGCGTCGC CTTCGCCAAG ACGGACCGCA TCTTCCCCAC GTTCATTGTC ACTGAGATGC CGCACCTCGT CTCCGGCCTG CTGATCGCCG CGATTTTAGC GGCTGCCATG TCGAACCTAA GCGCGGCCCT GAATTCGCTC ACTTCGACGT CGATCATTGA TTTCTGGCTG CGGCTCTATC CCAGTTCCAC CGAAAAAACG CGCATGCTAC TGTCTCGCGT CGGTACCATC GCCTGGGGAC TCGTTCTCTT CTGCCTTGCC ATTCTTTCTC GACGCGGCGG TAAGGTCGTC GAACTCGGCT TGACGATCGC TTCCGTCGCG CAGGGCGCCA TGCTCGGCAC GTTCCTGCTT GGCGTGCTGA CCAAGCGCGC GAACCAACTG GGCACAGCGA TCGGCCTCAC CGCCGGCTTC CTGGTGAACA TCTACATCTG GCAGGGAAAA GCGATTGTGC CGCAGTTTGC GCTGCCGCGC GCGGTCCCGT TCCCGTGGTA TGTGGCCATC GGATCGTTTG TGACGTTCGC CATCGGTTAT AGTGCGAGTC TACTTCTTGG AGGCAATCAT CAGCCCGACG CCGAAATCAG CGCCGAGTAA
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Protein sequence | MRFRKSQRTL KDYFLADRSI PWWALALSIV AAETSTLTLV SVPGLAYDTN FTFLQLAFGY LVGRVIICII LLPQYFKGYL FTAYQLIQRR FGGKLRTYTA GLFLITRAAA EGVRVYAVAL VIGIALGPQL GNFSDFSRDL IAISIVCILT LIYTFEGGLA AVIWTDVIQT FIYIGGTIVG FFTIIHLVPG GWGAIHATAA AAGKFRVFDF SWDFWKTYTF WSGVIGGAFL TTASHGTDQL IVQRLLAARS LKDSRWALLA SGVAVLLQFA LFLCVGAMLW VFYHGVAFAK TDRIFPTFIV TEMPHLVSGL LIAAILAAAM SNLSAALNSL TSTSIIDFWL RLYPSSTEKT RMLLSRVGTI AWGLVLFCLA ILSRRGGKVV ELGLTIASVA QGAMLGTFLL GVLTKRANQL GTAIGLTAGF LVNIYIWQGK AIVPQFALPR AVPFPWYVAI GSFVTFAIGY SASLLLGGNH QPDAEISAE
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