| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3340 |
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| Symbol | |
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| ID | 4071258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3961029 |
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| End bp | 3963590 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637985362 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_592415 |
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| Protein GI | 94970367 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.1537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAAAGG GATTGGTAAT CGTTGAATCG CCGGCGAAGG CGAAGACGAT TCAAAAATAT
CTCGGCAAAG GATACGAGGT CGAAGCCTCG CTCGGTCATA TCAAAGACCT GCCGAAAAAA
GGCCTCGGCG TCGATATCGA AAATAACTTC GACACCGAGT ATGTGGTTAT CCCGGGCAAG
GAAAAAGTTG TCGCCAAGCT GAAGAAGCTG GCGAAAGACG CTGACGCCAT CTACCTCGCG
CCTGACCCGG ACCGCGAAGG CGAAGCCATT GCTGCGCACC TTGCCGAGGA ACTTGGCGAC
GGCGACGGTA AGAAAAAGAA GAAGACCGAC AGTAAGCCGT TCTATCGCGT AACCTTCAAC
GAAATCACGA AAAAGGCCGT CCAGGAAGCC TTCGCGAAGC CTCGCGAAAT TGACCGCAAC
CTCGTGGATG CGCAGCAGAC GCGCCGCATT CTCGACCGTC TCGTGGGTTT CCAGGTCTCC
CCGCTGCTGT GGGACAAAGT CCGCCGTGGC CTCTCCGCCG GACGGGTGCA AACCGTCGCA
CTGCGACTGA TCGTCGAACG TGAGCGCGAA ATCAAGGCGT TCGTCTCCAA AGAATATTGG
ACGATCGACG CCCACCTGCA CGGGCAGAAG CCGCCGGATT TCGACGCGCG CTTCACCGGT
ATTGACGGCG AGAAGCTCGA AGTCGGCAAC GAAGAAGAGT CGAAGAAGAT TGTCGATCAA
CTGGACAATG CCGAGTGGTC GGTACGTTCG GTTGATAATC GCGAGCGTCG CCGCAACGCG
GCAGCGCCGT TCACCACCAG CAAGTTCCAG CAGGATGCCT CGCGCAAGCT GGGAATGAGC
GTGAAGCGCG CGATGATGAT CGCGCAGCAT TTGTATGAAG GCGTGGAACT CGGCGAAGAG
GGTACGGTCG GCCTCATTAC TTATATGCGT ACCGACTCCA CCCGCGTTTC CAATGAAGCG
CTGACCGAAG TACGCGAACT GATCGGCACC AGCTACGGCC CGCAGTTCCT GCCGGAATCG
CCCAACGTTT ATAAGCAGAA GAAGGATGCG CAGGGCGCGC ACGAAGCCAT TCGCCCTTCG
TCCGTTGCCC ATACGCCCGA TGATCTGAAG GCCTATCTCA AAGACGATGA GATGAAGGTC
TACAAGTTGA TCTGGCAGCG CTTCGTCGCT TCGCAGATGG CGCCTGCGGT CTTCGATCAG
ACCACGGTGG ACATTGATGC CAAGGCCGAT CGCACCTACA ACTTCCGCGT GACCGGTTCG
GTCCTCAAGT TCGAAGGTTT CCTCAAGGTT TACGAGGAGT CGAAGGAAGG CAAGGACGAG
GAAGATGATG CGCTGAAGCA CAAGCTGCCG CCGCTCGTCG AGGGCCAGAC GCTCACGCTG
AAGGCGATCA AGCCGGAGCA GCACTTCACC GAGCCGCCAC CGCGTTACAA CGAGGCGTCG
CTCGTGAAGG AACTGGAAGA GCAGGGAATC GGGCGGCCTT CCACGTACGC CGCCATTCTC
AGCACCATCC AGGACCGTGG CTACGTGCAG AAGACGCCAG GCCGCGGAGG CAAGTTCTTC
CCAACTGAAA TCGGCATGGT CGTCACCGAC CTGCTGGTCG CCAACTTCAA AGACATCTTC
GACACCAAGT TCACGTCGCG GATGGAAGAA GAACTCGACG AAGTGGAAGA CGGCCAGAAA
AAGTGGACCG ACACGCTGAA AGAGTTTTAC GACAAGTTCG AAACCAACCT CGACTATGCG
CAGAAGCACA TGGAAAACAT CAAGCGCATG GAGAAGCCCA CCGACGAAAA GTGCGAGCGT
TGCGGCTCAC CACTCGTCAT CAAGTGGGGC AAGCACGGTT CGTTCTATGC GTGCAGTTCG
TACGACAAGA AGGACCCGAA CAGCTGCACG TTCACCAAGG AAAATCCGAT CGACCTGCCC
GACCTCGACA CCGCCGATGT GCAGGAGACC GAGCAGGAAG AGTACTGCGA GAACTGCGGG
CGCGGAATGG TGCTGAAGCG CGGGCGCTTC GGTCAGTTCA TGGCTTGTAC CGGCTATCCG
GAGTGCAAGA CCACGCGGCG CCTCGACCAG GCCAAGAAGA TTCCCGATGT TCCGCTCGAT
GAGAAGTGCC CGGAATGTAC GCGGCCTCTC GTACTACGAC ATGGACGCTT CGGCGAGTTC
GTCTCGTGCA GCGGCTATCC GGAGTGCAAG TGGATCAAGC AGAACTTCGT GGGCGTGAAG
TGTCCGCAGT GCAAGGAAGG CGAGATCGTC GAGAAGAAGG CGCGTCGCGG CAACTTCTTC
TACGGCTGTG CCCGCTATCC CAAGTGCGAT TTCACGTCGG CCAACAAGCC GGTGGCGCAG
CCGTGCCCGA AGTGCGGCAG CGAGTATGTG CTGGAGAAAA AGCTGAAGTC CGGTACCTAC
CTCACCTGTC CGAACAACAA GGCGACCGCG TCGGAAGAGC CCAAGCGTCG CGGCAAGAAG
AAAGCAGCAG AGACCGAGAA CGCCGTGAAA TGTGACTACT CGGTGAAAAT CGCGGAACCG
GAAAATACCG ATGAGCCGGA AAAGTCCGCG GACGTAGCGT AA
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| Protein sequence | MAKGLVIVES PAKAKTIQKY LGKGYEVEAS LGHIKDLPKK GLGVDIENNF DTEYVVIPGK
EKVVAKLKKL AKDADAIYLA PDPDREGEAI AAHLAEELGD GDGKKKKKTD SKPFYRVTFN
EITKKAVQEA FAKPREIDRN LVDAQQTRRI LDRLVGFQVS PLLWDKVRRG LSAGRVQTVA
LRLIVERERE IKAFVSKEYW TIDAHLHGQK PPDFDARFTG IDGEKLEVGN EEESKKIVDQ
LDNAEWSVRS VDNRERRRNA AAPFTTSKFQ QDASRKLGMS VKRAMMIAQH LYEGVELGEE
GTVGLITYMR TDSTRVSNEA LTEVRELIGT SYGPQFLPES PNVYKQKKDA QGAHEAIRPS
SVAHTPDDLK AYLKDDEMKV YKLIWQRFVA SQMAPAVFDQ TTVDIDAKAD RTYNFRVTGS
VLKFEGFLKV YEESKEGKDE EDDALKHKLP PLVEGQTLTL KAIKPEQHFT EPPPRYNEAS
LVKELEEQGI GRPSTYAAIL STIQDRGYVQ KTPGRGGKFF PTEIGMVVTD LLVANFKDIF
DTKFTSRMEE ELDEVEDGQK KWTDTLKEFY DKFETNLDYA QKHMENIKRM EKPTDEKCER
CGSPLVIKWG KHGSFYACSS YDKKDPNSCT FTKENPIDLP DLDTADVQET EQEEYCENCG
RGMVLKRGRF GQFMACTGYP ECKTTRRLDQ AKKIPDVPLD EKCPECTRPL VLRHGRFGEF
VSCSGYPECK WIKQNFVGVK CPQCKEGEIV EKKARRGNFF YGCARYPKCD FTSANKPVAQ
PCPKCGSEYV LEKKLKSGTY LTCPNNKATA SEEPKRRGKK KAAETENAVK CDYSVKIAEP
ENTDEPEKSA DVA
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