Gene Acid345_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3324 
Symbol 
ID4070286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3940813 
End bp3941580 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content59% 
IMG OID637985346 
ProductABC transporter, ATPase subunit 
Protein accessionYP_592399 
Protein GI94970351 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC TTGAGATGGC TAGCATGAGC GAAGTAAAAC CGACTACGCC CCCGGCGTCC 
TGCATCATCT GCACGGAAGA CCTCTGGAAG ACCTACGACA TGGGCTCGGA ACAGCAGGTG
CACGCCCTTC GCGGCGTCAA CCTGCGCATC GAGCGCAACG AATACGTTGC CATCATGGGC
CCTTCCGGTT CCGGCAAGTC AACCCTGATG AACCTCATCG GCTGCCTCGA CACGCCGAGC
AAAGGTCTCT ACTGGCTAAA CAGCCAGCTC GTCAGCGAAC TCGACGACGA TGAACTCGCA
CGCATCCGCA ATAAGGAAAT CGGATTCGTC TTCCAGACGT TCAACCTGCT CGCGCGTGCC
ACCGCACTCC ACAATGTCGA GTTGCCGTTG ATCTACGCCG GTGTACCGGC ATCCGAGCGC
ATCGAGCGCG CAAAAGATTC GCTAACCAAA GTCGGCATGG GACCGCGCAT GCATCACAAG
CCCAACGAAC TCTCCGGCGG TCAGCGTCAG CGCGTCGCCA TCGCTCGTGC CCTGGTCAAT
CGCCCATCCA TCATCCTCGC CGACGAGCCG ACCGGAAACC TCGACTCCCA AACCGGCGTC
GAAATCATGG CCCTCTTCGA CACCCTGCAA TCGCAAGGCA ACACCATCGT GCTCGTAACC
CACGAACACG ACATCGCGGA GTACGCGCAT CGTGTCGTCT ACATTAAGGA CGGCGTTGTC
TCGCGCGACG AAGTCACCGA ACGTGGCGCC AGTCTCGCAA AGAAATAG
 
Protein sequence
MATLEMASMS EVKPTTPPAS CIICTEDLWK TYDMGSEQQV HALRGVNLRI ERNEYVAIMG 
PSGSGKSTLM NLIGCLDTPS KGLYWLNSQL VSELDDDELA RIRNKEIGFV FQTFNLLARA
TALHNVELPL IYAGVPASER IERAKDSLTK VGMGPRMHHK PNELSGGQRQ RVAIARALVN
RPSIILADEP TGNLDSQTGV EIMALFDTLQ SQGNTIVLVT HEHDIAEYAH RVVYIKDGVV
SRDEVTERGA SLAKK