| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3321 |
|---|
| Symbol | |
|---|
| ID | 4070283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3935514 |
|---|
| End bp | 3937205 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637985343 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_592396 |
|---|
| Protein GI | 94970348 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.781376 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTA AGCTCGGCTG GTTGCTTCTC GTGATCGCGT GGTCGGCCAT GGCGTCGGCT
AGCGGGCATT CAGGGCAGGT GTCGGGCTTC GTGCGCAATG CCCAGGGCGT TGCGCAGATG
GGTGCTGCGG TCGAGATGTC AAAGCTCGGG TCGGAAGATA TCTTCCGCGC CTTTACGGAC
ACGAAGGGCT ATTTCGCCTT GCCCGCGCTT GCTCCCGGAA AATACACGGT CAAGGTCACC
GCACCCTCAT TCCTACCCAG CGTTACGCAG AACCTCGCGC TGCAATCCGG CGCGCGGTTG
GTGATGAACA TCACCTTGAA CACATTGTTC GAGGCGGTAA CCCTGCTTCC AGAACGCAAG
AAGCCGAGTG ACGATCAGGA CGACTGGAAG TGGACGCTAC GCTCGATGGC GAACCGTCCG
ATCCTGCGCG TGGTAGATGG CACACCGTCG TTGGTAAGCG AAGCCAAGAC GAATGATTCC
AGCCACGGCA CGGTTTCGTT TATCGCAGGG CCGCAATCGG CGGGATTCGG ATCCAGCGGC
GACTACGGTA CGTCGTTCAA CTGGGAAGAG TCGATGTTCT CCGGTGGCAC GTTCTCGTTC
GCGGGCAACG TGGCCGGTGG CGAGGGCGGA GATCCGGGCG GAGTAGTTCG AGCCGCTTAC
CGGCACGAGA TGGCGGATGG CACCAGTCCG GAAGTTTCGC TGGTAGCACG CCGGGTTACG
AGCCCCAATT TTGGCTTCCA CTCACAGACG TTGCAATCGA TTGAAGCGAC GGCCGCGAAC
ACGACACGCC TGATGCAGTC GCTGGAAGTG AATTACGGCG CGGCGTTGCA GGAGATCCAG
TTCGCGGGCA AGGAAACAGC ATTCCGTCCA TTTGCCAGCG TGGCGTGGCA CTTCACGCCG
AACACCGTCA TTGAATATCG CTACGCGACG ACCGTGCCGA ACATGCGCGA TCTTAAGGGC
TACGATACGG CCCCGGCGGA TTTCAGCGAG TCCGATCCGC GCGTCACGCT GCTGAACGGG
CACGGCGAGG TGGAGAGCGC GTCGCACCAC GAGCTAGCGG TCTCACAGCG CTACGGCAAG
AACAGCATCC AGGTCGCGAT CTATGCCGAC CACATTACGA ACACTGAACT GCTTGGCCTG
GGAAATGTTT CGGCCATGGA AGGCAATGCA TTGCCGGACG TATTCGGCGG AACGTTCAGC
TACAACGGTG GGACGTTCTC GGCAAACGGC ATGCGCATTG TGTTTGAGCG GAAGCTGCCG
CACGATGTGA CAGCGACGCT CGACTACGCC TTCGGAGGCG TGCTCGATCT CGATGGGGAG
AACATTGCGT GGAGCGAAGT CCGCAACATG CTGGAGGAAC ATCGGACCCA TGCGATCACC
GCGAAGGTGA CAGGGACGGT GCCGGGGTCG CGTACCCGTT GGATCGCTTC GTATCGCTGG
ATGAACGGCA CCGCGATCAC GCCGGTGGAT TTGTTTAACA CCTCGCCGGG CCAATCGGAC
CCGTTCCTCA ACGTATTCGT ACGGCAACCA CTGCCGCACA GTCACCTGAT CCCGGGAAAG
ATGGAAGCCG TGGTGGACAT GCGTAATCTG CTGGCGCAGG GTTACATTCC CGTTATCAGC
CCGGATGGCG GGACGGTGTA CCTGGTGCAG TCGGCGCGGT CGGTCCGCGG CGGCGTTTCG
TTTACGTTCT AA
|
|---|
| Protein sequence | MTRKLGWLLL VIAWSAMASA SGHSGQVSGF VRNAQGVAQM GAAVEMSKLG SEDIFRAFTD
TKGYFALPAL APGKYTVKVT APSFLPSVTQ NLALQSGARL VMNITLNTLF EAVTLLPERK
KPSDDQDDWK WTLRSMANRP ILRVVDGTPS LVSEAKTNDS SHGTVSFIAG PQSAGFGSSG
DYGTSFNWEE SMFSGGTFSF AGNVAGGEGG DPGGVVRAAY RHEMADGTSP EVSLVARRVT
SPNFGFHSQT LQSIEATAAN TTRLMQSLEV NYGAALQEIQ FAGKETAFRP FASVAWHFTP
NTVIEYRYAT TVPNMRDLKG YDTAPADFSE SDPRVTLLNG HGEVESASHH ELAVSQRYGK
NSIQVAIYAD HITNTELLGL GNVSAMEGNA LPDVFGGTFS YNGGTFSANG MRIVFERKLP
HDVTATLDYA FGGVLDLDGE NIAWSEVRNM LEEHRTHAIT AKVTGTVPGS RTRWIASYRW
MNGTAITPVD LFNTSPGQSD PFLNVFVRQP LPHSHLIPGK MEAVVDMRNL LAQGYIPVIS
PDGGTVYLVQ SARSVRGGVS FTF
|
|---|
| |