| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3311 |
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| Symbol | |
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| ID | 4070273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3923338 |
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| End bp | 3924312 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637985333 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_592386 |
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| Protein GI | 94970338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | [TIGR03028] polysaccharide export protein EpsE |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.328062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGGC TGACTGACGC AACGAAGTAC CTGGCGATCG CTGTCCTGGT CGCGGGCGGG
ATTGTGTCGA ACCCAGGGAG CACGGCCATT GCCCAAGAGC CGGCGGCGCA GGAACCGGCG
GTACAGGCGC CGGCAGATGC CGCGCAATCC GCCGAACGTT CCGCGATCCG CATCGGTGCA
GGCGACAAAC TCGAAGTAGT TACGTATCGC GTTCCTGAAC TTACGCTCCG CACGCAAGTG
GGCAGTAACG GCGACGTCAA GTTTCCGCTC GTCGGCGAGT TGAAGATGGC GGGATTGACC
GTTTCCGAGG CACAGACCAA GATCGCGGAT GCATTGGTTG CGCAAGGGTA TGTACTGAAT
CCGCAGGTAA CGATCGTGGT GACGGAGTAC GCCACCCAAG GAGTGTCGGT GCTGGGCGAA
GTCTCGCAGC CTGGTATCTA TCCGTTTTTT GGTCCGCATC GCCTGACGGA TGTGCTCTCG
GCTGCCGGTG GACTCACGGT GAAAGCCGGT CAGACAATCA CCTTGATCCA TAAGGCGGAC
CCGGACAACA AGATTTCCCT CGATATTCCG CGTGATCTCG CACATTCTCC CAACAACGTC
GAAGTCTTCC CGGGCGACAC GATCATCGTC TCGAAGGCGG GCGTGGTGTA TGTGGTGGGG
GAAGTGAACC GGCCGGGCGG GTTCCTGCTC GAGAACAACA TGCCGATCTC GGTGCTTCAG
GCAATCGCGT TGGCGCAGGG ATTCACGCGC GATGGAAACC AGAAGGAAGC ACGGATCGTC
CGCCGGACTC CGACCGGTCT GCAGGAAATT CCGATCCAGT TGAACAAGTT GATGGCTGGG
GATGGCCCGG ATCGGTTGTT GAGTCCGGAT GACATCGTGT TTGTGCCGGC GAGCAACATG
AAGATTTTGA GACGGCGGTT CGGTGATGCC GCAATTGCCG CGTCGAGTGC GGCAGTGTAC
TACGCGTTCC ACTAA
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| Protein sequence | MRRLTDATKY LAIAVLVAGG IVSNPGSTAI AQEPAAQEPA VQAPADAAQS AERSAIRIGA
GDKLEVVTYR VPELTLRTQV GSNGDVKFPL VGELKMAGLT VSEAQTKIAD ALVAQGYVLN
PQVTIVVTEY ATQGVSVLGE VSQPGIYPFF GPHRLTDVLS AAGGLTVKAG QTITLIHKAD
PDNKISLDIP RDLAHSPNNV EVFPGDTIIV SKAGVVYVVG EVNRPGGFLL ENNMPISVLQ
AIALAQGFTR DGNQKEARIV RRTPTGLQEI PIQLNKLMAG DGPDRLLSPD DIVFVPASNM
KILRRRFGDA AIAASSAAVY YAFH
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