| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3295 |
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| Symbol | |
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| ID | 4072707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3902079 |
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| End bp | 3904166 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637985316 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_592370 |
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| Protein GI | 94970322 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAC CGCCGCGAAC TCCCGCCCAG CCTGTGCCCG GCCTAACCCA CCCGCTCGGC
GCGACCATTT GCCCTGAGGG CGTTAACTTC AGCCTATTTT CGCGGCATGC TACCGGTGTC
GAGCTGCTTT TCTTTGACCA CGCAGAAGAC GCCCAGCCTA CTCGTGTGTT CCGGCTGGAT
CCCGTGCGAA ATCGAACCTA TTACTACTGG CACCTCTGCA TACCGGACGT CTCGCCCGGC
CAGCTATACG GCTATCGCGT GTACGGGCCA TTCGCGCCGG ACAAAGGGCA CCGCTTCAAT
CCCGAGAAGC TGCTGCTCGA TCCTTATGGT CGTTGTGTCG TCACGCCGAA GACATATAGC
CGGGATGCCG CCATTACTCC GGGCGACAAC TGCGCCACGG CGATGAAGAA TGCCGTCGTG
GACGTGCACG ATTACGACTG GGAGGGCGAT GAACCGTTAC GATGTCCCGC CAGCCGAACC
ATTGTTTACG AGATGCATGT CCGCGGCTTC ACCCGGAATC CCAACTCCGG CGTTGCTGAA
GAGAAGCGCG GCACATTTGC TGGTGTCATC GAAAAAATTC CTTACCTGAA AGATCTCGGG
ATCACCGCGG TTGAGTTGCT GCCGGTTTTC GAATTCGATC CGCTCGACTG TCCTCCGGGG
CTGGTGAATT ACTGGGGCTA TGCGCCCGTT TCTTTCTTCT CGCCGCACAA GGCGTACAGC
TCAGGGCACG CCTATCTCGC GGCGATCAAC GAATTCCGCG ACATGGTGAA AGCGCTGCAT
CGCGCGGGAA TCGAAGTCAT CCTCGACGTG GTTTACAACC ATACCGCTGA AGGAAGTGAA
ACCGGTCCAA CCTTCAGCTT CAAGGGCATT GATAACCTCA CCTACTACAT TCTCGAGAGT
GATCGTTGCC GCTACGCCAA CTACAGCGGT ACCGGCAACA CATTCAAAGC CAACCATCCC
GTCGTCCGCC GCATGATTGT GGACAGCCTT TGTTACTGGG TGGAAGAGAT GCACGTGGAT
GGTTTCCGCT TCGACCTCGC GTCGATCCTC GCGCGCGATT CCAGCGGCAA CACGATGGCG
AATCCGCCGG CGCTGTGGGA CATCGAATCC GAGCCGCGCC TGGCTGGAAC GAAGTTTATG
GCCGAAGCCT GGGACGCCGC CGGCCTCTAC CAGGTCGGCA CCTTTGTCGG CGACTCTTGG
AAGGAATGGA ACGGCCGCTT CCGCGACGAT GTGCGCGACT TCTTTCGCGG CGAGGATGGC
ACTGTTTGCA AGCTGGCGTC GCGCTTACTT GGCAGCCCGG ATATCTACGG GCACAAGGGA
AGAGAGGCCG AGCAGAGCGT GAACTTTGTC ACCTGTCACG ATGGCTTCAC CCTCAACGAT
CTGGTTTCGT ACGAGGTGAA GCACAATGAA GCGAATCGCG AGCAGAATCG CGATGGTCAC
GACGACAACC GGAGCTGGAA CTGCGGCGTG GAAGGCCCGA CGAATGATCC TGCGATCAAC
CGGTTGCGCA ATAAACAGGT AAAGAATTTT CTCGCGACAA CACTGCTCTC GCTCGGCATG
CCCATGCTCA CCATGGGTGA CGAAGTGCGC CACACGCAGC GCGGCAACAA CAACGCCTAT
TGCCAGGACA ACGAGCTCAG TTGGTTCGAC TGGAGCTTGC TGGACGAGCA TGCCGATATT
CACCGCTTTG TGAAAATGAT TGCCCTGAGG CGTCTTCTGC GCGACGTTGC GCCGGAGCAG
GAACGTAGAT CACTGACGGA ATTTCTCGAG TCGGCACGCA AAACCTGGCA TGGTGTGGAA
CTCGACCAAC CGGACTGGGC GGACCATTCG CACTCGATCG CGCTGTGCAT TGAGGTGGCA
GAGGAAGGCA TCGTCTTCCA CTTTATTCTA AACGGCTACA CCGAAGGGCT CGATTTCGAA
CTTCCACCAC GCCTCAACGG TTCGCGCTGG CGACGGTGGA TTGATACCAG CCTCGACTCT
CCTGATGACA TCGTGAACTG GCGAACCGCT CCCGCCATAC AGGGCCCGCG TTACCACGCG
GCCGCGCATT CCACGGTTGT GCTGATCTCC GCAACGGACG GCCCATAG
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| Protein sequence | MARPPRTPAQ PVPGLTHPLG ATICPEGVNF SLFSRHATGV ELLFFDHAED AQPTRVFRLD
PVRNRTYYYW HLCIPDVSPG QLYGYRVYGP FAPDKGHRFN PEKLLLDPYG RCVVTPKTYS
RDAAITPGDN CATAMKNAVV DVHDYDWEGD EPLRCPASRT IVYEMHVRGF TRNPNSGVAE
EKRGTFAGVI EKIPYLKDLG ITAVELLPVF EFDPLDCPPG LVNYWGYAPV SFFSPHKAYS
SGHAYLAAIN EFRDMVKALH RAGIEVILDV VYNHTAEGSE TGPTFSFKGI DNLTYYILES
DRCRYANYSG TGNTFKANHP VVRRMIVDSL CYWVEEMHVD GFRFDLASIL ARDSSGNTMA
NPPALWDIES EPRLAGTKFM AEAWDAAGLY QVGTFVGDSW KEWNGRFRDD VRDFFRGEDG
TVCKLASRLL GSPDIYGHKG REAEQSVNFV TCHDGFTLND LVSYEVKHNE ANREQNRDGH
DDNRSWNCGV EGPTNDPAIN RLRNKQVKNF LATTLLSLGM PMLTMGDEVR HTQRGNNNAY
CQDNELSWFD WSLLDEHADI HRFVKMIALR RLLRDVAPEQ ERRSLTEFLE SARKTWHGVE
LDQPDWADHS HSIALCIEVA EEGIVFHFIL NGYTEGLDFE LPPRLNGSRW RRWIDTSLDS
PDDIVNWRTA PAIQGPRYHA AAHSTVVLIS ATDGP
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