Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3293 |
Symbol | |
ID | 4072705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3899237 |
End bp | 3900394 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637985314 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_592368 |
Protein GI | 94970320 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCG CGGAAATCGT CATCATTGGC GGAGGCATCG TCGGCTCCAG CATCGCCTGG CACTTAACCG AAGCCGGTGT GACCGACGTG GTAGTTCTTG AGCGCGAGAC GCAGCAGGGC AAAGGCTCTA CCGGGAAAAG TATGGGCGGG GTACGCGCCC AGTTTTCCAC CGACGTCAAC ATCCGCATGT CGCTCTATTC GATTCCGTTT TACGCCGAGT TCGACGAGCG CCTCGGCAAT CCTGCGGGTT ATCGTCCCCA AGGATATTTG TTTCTGGCGA CGAAGCCCGC GCACCTGGAT TACCTGAAGG CGAACCAGGA GAAACAGATC GCGTTGGGAT TGAAAACGGC GCGCATGGTT TCTGGCGATG AGATCGCATC AGAGTATCCG CTACTTCGCA CCGACGATGT TCTCGGCGGC GCGTTCTGTT CGACCGACGG CTTCGTCGAT CCATACAGCG CGATGTGCGG ATTCAGCGCG AGTGCCTGCG ATCGTGGAGT GCGGGTGTGG AAACACGCGG AGGTCATCGC GATCCATCGC GACGCGAACG GTGTTTGCGA AATTGAAACC ACGCGTGGAT CAATTGCAAC CCGCAAAGCT GTGAACGCCG CCGGAGCTTG GGCCGCATCG GTTGCGAAAC TCTGCAACCT TGATTTGCCC GTCGAGCCCC TGCGCCGCAT GCTGCTGCCG ACCGAACCGT TCGCTGACTA TCCGCATCGT GCGCCGATGA CCATCGATAT GAGCAACGGC TTCCACTTCA GGCCGGAGAG CCTCGGGTTT CTGCTTGCAT GGGCCGACCC CCAGGAGACG CGCAGCTTCG ATACCAACTT CGATCCAACG TTCGTCGAGA AGGTACTTAC GCTGGCGGCC GATCGCGTCC CGTGTTTTGA GAACCTCGCC ATCAATCCCA AGCGCGGGTG GGCCGGTTTG TACGAGATGA CGCCGGACCA TCATCCGATC CTCGGGGAAG CGCCCGGAGT TCCCGGCTTC TACCTTGCCA ACGGGTTCAG TGGTCACGGC GTGATGCATG CACCCGCGAC CGGCAAGATT CTCTCCGACC TGCTGCTGAA TGGCAGAACC GAGTTGATCG ATGCAGAGTT GCTCTCGCTA TCGCGCTTTG CCGAAGACCG CATGATCCAC GAAACTGCAG TGCTTTAG
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Protein sequence | METAEIVIIG GGIVGSSIAW HLTEAGVTDV VVLERETQQG KGSTGKSMGG VRAQFSTDVN IRMSLYSIPF YAEFDERLGN PAGYRPQGYL FLATKPAHLD YLKANQEKQI ALGLKTARMV SGDEIASEYP LLRTDDVLGG AFCSTDGFVD PYSAMCGFSA SACDRGVRVW KHAEVIAIHR DANGVCEIET TRGSIATRKA VNAAGAWAAS VAKLCNLDLP VEPLRRMLLP TEPFADYPHR APMTIDMSNG FHFRPESLGF LLAWADPQET RSFDTNFDPT FVEKVLTLAA DRVPCFENLA INPKRGWAGL YEMTPDHHPI LGEAPGVPGF YLANGFSGHG VMHAPATGKI LSDLLLNGRT ELIDAELLSL SRFAEDRMIH ETAVL
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