Gene Acid345_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3293 
Symbol 
ID4072705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3899237 
End bp3900394 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content59% 
IMG OID637985314 
ProductFAD dependent oxidoreductase 
Protein accessionYP_592368 
Protein GI94970320 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG CGGAAATCGT CATCATTGGC GGAGGCATCG TCGGCTCCAG CATCGCCTGG 
CACTTAACCG AAGCCGGTGT GACCGACGTG GTAGTTCTTG AGCGCGAGAC GCAGCAGGGC
AAAGGCTCTA CCGGGAAAAG TATGGGCGGG GTACGCGCCC AGTTTTCCAC CGACGTCAAC
ATCCGCATGT CGCTCTATTC GATTCCGTTT TACGCCGAGT TCGACGAGCG CCTCGGCAAT
CCTGCGGGTT ATCGTCCCCA AGGATATTTG TTTCTGGCGA CGAAGCCCGC GCACCTGGAT
TACCTGAAGG CGAACCAGGA GAAACAGATC GCGTTGGGAT TGAAAACGGC GCGCATGGTT
TCTGGCGATG AGATCGCATC AGAGTATCCG CTACTTCGCA CCGACGATGT TCTCGGCGGC
GCGTTCTGTT CGACCGACGG CTTCGTCGAT CCATACAGCG CGATGTGCGG ATTCAGCGCG
AGTGCCTGCG ATCGTGGAGT GCGGGTGTGG AAACACGCGG AGGTCATCGC GATCCATCGC
GACGCGAACG GTGTTTGCGA AATTGAAACC ACGCGTGGAT CAATTGCAAC CCGCAAAGCT
GTGAACGCCG CCGGAGCTTG GGCCGCATCG GTTGCGAAAC TCTGCAACCT TGATTTGCCC
GTCGAGCCCC TGCGCCGCAT GCTGCTGCCG ACCGAACCGT TCGCTGACTA TCCGCATCGT
GCGCCGATGA CCATCGATAT GAGCAACGGC TTCCACTTCA GGCCGGAGAG CCTCGGGTTT
CTGCTTGCAT GGGCCGACCC CCAGGAGACG CGCAGCTTCG ATACCAACTT CGATCCAACG
TTCGTCGAGA AGGTACTTAC GCTGGCGGCC GATCGCGTCC CGTGTTTTGA GAACCTCGCC
ATCAATCCCA AGCGCGGGTG GGCCGGTTTG TACGAGATGA CGCCGGACCA TCATCCGATC
CTCGGGGAAG CGCCCGGAGT TCCCGGCTTC TACCTTGCCA ACGGGTTCAG TGGTCACGGC
GTGATGCATG CACCCGCGAC CGGCAAGATT CTCTCCGACC TGCTGCTGAA TGGCAGAACC
GAGTTGATCG ATGCAGAGTT GCTCTCGCTA TCGCGCTTTG CCGAAGACCG CATGATCCAC
GAAACTGCAG TGCTTTAG
 
Protein sequence
METAEIVIIG GGIVGSSIAW HLTEAGVTDV VVLERETQQG KGSTGKSMGG VRAQFSTDVN 
IRMSLYSIPF YAEFDERLGN PAGYRPQGYL FLATKPAHLD YLKANQEKQI ALGLKTARMV
SGDEIASEYP LLRTDDVLGG AFCSTDGFVD PYSAMCGFSA SACDRGVRVW KHAEVIAIHR
DANGVCEIET TRGSIATRKA VNAAGAWAAS VAKLCNLDLP VEPLRRMLLP TEPFADYPHR
APMTIDMSNG FHFRPESLGF LLAWADPQET RSFDTNFDPT FVEKVLTLAA DRVPCFENLA
INPKRGWAGL YEMTPDHHPI LGEAPGVPGF YLANGFSGHG VMHAPATGKI LSDLLLNGRT
ELIDAELLSL SRFAEDRMIH ETAVL