| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3292 |
|---|
| Symbol | |
|---|
| ID | 4072704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3897924 |
|---|
| End bp | 3899090 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637985313 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_592367 |
|---|
| Protein GI | 94970319 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3275] Putative regulator of cell autolysis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.210554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAATT CCGTGAAGCG CATACTCCTT AGATTAGGGC TCATTTTCGG CGCATGGACG
GCGTTTGCAC TCGTCGCAAT CGTGAATGTA TACCTCGTCC GCTCCAAGCT CGGCATGACT
GCCGAGTTCT GGAAGACCGC CGCCGAAATC GTCCTGGAGT ATTGGGTTTA CGCGGCGCTC
ACGCCGCCTG TGCTGTACGT TGCACACCGC TTCCCATTCA CCTCGAAGAA CTGGCCGCAA
ACTGTCGTCG TCCACTTCGC CTGTTACATG GCATTTTCCT GGGCAGCGGT CGGTCTGGAC
GAGTTGCTCA AAGTCCCGAT CATGTTGCCC AAGCAGTTCC AGGGTTCCAC CGTCTGGTTC
CGCTTTCTGC ATACCTTCTA CGACAGCCTC TGGATGTACG TGCCGCTAAT CGCGCTCTCG
GCGGCCTACG AGTACTACGC CCGCTTCACC GAACGCGATA AGCGCGCTGC CCAGCTGGAA
GCCCAGCTCA CCCGCGCCGA GCTGGAAGCC CTGCGAAACC AATTACATCC GCACTTCCTG
TTCAATACCC TGAACTCTAT CGCCAGCCTG ATGCACGAGG ACGTGCAGGG CGCCGACGAC
ATGATCGCCG ACCTCAGCTA TATGCTGCGC GCTTATCTGC GGGACACCAA TGAGCAGGAA
ATATCTTTGC GGCAAGAATT GGACCTTTTG GAGACCTATT TACGTATCCA GAAGAGGCGG
TTTGAGGACC AGCTGAGCTA TACCATCGAC GTCGCGGAAA CCTTGTACAA CGCCGCGGTG
CCGACGCTCT TGCTGCAGCC TTTCGTGGAG AACGCGATTC TCCACGGGAT TGCCCCGAGC
TGCTCGCCGG GCCACGTAAC GGTTTCCGCG CGCCAGCTTG GCGGACACCT GATGCTTACA
GTGTTTGACG ACGGTGTCGG CTTTACGCCG GGCGAAATGG AAGGGATCGG TGTAAGCAAT
AGCCGGTCGA GATTGAAGCA GTTATACGGC GAAGACCAGA AAGTTGAATT GGTCAGCGCC
CCAGGCCAAG GAACGACTGT AACGGTGAGG TTGCCGTTCC AGTTCATTTT GCCGAATGCA
GGGAGCATGG TCGATGAAGA TCCGAACCTT GATCGTGGAC GACGAACCTC TGGCAAGACG
ACGAATACTG TCTCTACTTC AGCCTGA
|
|---|
| Protein sequence | MANSVKRILL RLGLIFGAWT AFALVAIVNV YLVRSKLGMT AEFWKTAAEI VLEYWVYAAL
TPPVLYVAHR FPFTSKNWPQ TVVVHFACYM AFSWAAVGLD ELLKVPIMLP KQFQGSTVWF
RFLHTFYDSL WMYVPLIALS AAYEYYARFT ERDKRAAQLE AQLTRAELEA LRNQLHPHFL
FNTLNSIASL MHEDVQGADD MIADLSYMLR AYLRDTNEQE ISLRQELDLL ETYLRIQKRR
FEDQLSYTID VAETLYNAAV PTLLLQPFVE NAILHGIAPS CSPGHVTVSA RQLGGHLMLT
VFDDGVGFTP GEMEGIGVSN SRSRLKQLYG EDQKVELVSA PGQGTTVTVR LPFQFILPNA
GSMVDEDPNL DRGRRTSGKT TNTVSTSA
|
|---|
| |