Gene Acid345_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3275 
Symbol 
ID4072687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3880179 
End bp3882074 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content58% 
IMG OID637985296 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_592350 
Protein GI94970302 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCA TACGCCTGAA GACAAAACTC GTCATTGCCA TCAGCGCGAT GGTCTTCGCC 
TTGGTCGCGA CTCTGTCGTA CCTCTACGTA TCGCAACTCG TCCTTCAGCG TATTCGGTCT
GCGTATAACA ACGGCGACTT TGTGGCCCGC GAGATTCGCG ACGCCGCACG CGATGCCGTC
GCGGTTGACC TGCGCAACAC CGATATCAAT CCCTCAGATT CCGCCAAGAT CCGCGCCGTC
ATTGCCGACA GCCTGCAAAC GGATCCCGGC GTAAACACGC TGTTGCAGTC GATCGTCGGC
TACTCTCCGA CAACCTACGA CGCAGGCATC TATGACCGGG ATGACCGCGT GCTCGTTCAC
ACCGACTCAT CACTGCTCGA CAAGGTCGTT CATTCGCGGG AGGACTTTGC CCAAGTCCGC
GATGGCAGCT TCTTCCGCCA GATGAACGTC GTCTATGGCA AGCCGGAGGT CTATGACATT
CACCTGCCGA TCCAACGGGA CGGCAAGCCC TTTGGCGACA TTCGTATTGG CGTTTCGACT
GTCTTCCTGA AGAGCGAACT GCGACCGCAG TTGAACCGCG CACTCACACT CTCGATTGTT
TGCGTGCTGG TGTCCTTCCT GCTCGCGGCG GTGCTTTCGA ACCTCGCGCT GCGACCACTC
GAAGCGATTG GGCGACGGCT CGACCAGATG ACCGTGGACA CTGGCGAAGC ACAGCCGACC
CTCGATTTGC GGAACGATGA GTACGGCGCC ATCACGAAGA TCGATCGCCT CGGCCGCGAA
ATTCGCGACG TGAAAGAAGT CTTCAGCGCG TTGAAAGAAA ATCTCGACCA GATCATGGGC
ACGTTACAGG ACGGCCTCAT GCTCTTTACC CGCGATTGGC GCGTGGTGTT GGTCAGCGCA
TCGGCAGAGC GGTTTGTCGG AGTGCCGCGC GGAGAGATGC TCGGCAAACA CGTGGAAGAG
GTCTTCACCG ATCACACCAA GATGGGCCGC ATCGTTCTCG ACGCCTATGC TCTGCATCAA
TCAGTGCCGC AGCGTGAGAT TGAAATCGAA AAGGGCCGCC GAGTACAGTT TGCGCTGGAT
TTCATCGAGG AGCGAGGGCA GCGCATCGGC GCGCTCATCA CCATTCGCGA TGCGGAATCG
GTTCGCCGGA TCGAGAACGA AATTGAACTC TCACGCCGTC TTGCTGCTAT CGGACGGCTG
ACTTCCGGTG TGGCGCACGA AGTCAAGAAC CCGATTAACG CCATCGTGGT GCATCTCGAA
ATCCTGAAGA ACAAGCTGCA GGAAGTCGCG CCCGATGCGC GACGCCACAT GGACATCATC
GAGAACGAGA TTCGCCGGCT CGATCGTGTG GTCCAGACAC TGGTGGACTT CACGCGTCCC
GTCGAACTGA AACTCTTCGA TGCGGATCTG CGGAAGATCG CCGAGGAAGT GGCGCTGCTC
GCCGGACCCG AAGCCGCGAA CAAGAACGTG CACATCGAAT TCAACGCGGT CGAGAAAACG
CTTCCCGTGT ACGTGGATAC GGACCTGGTG AAGCAGGCAA TCCTGAACAT CGTGATCAAC
GGGGTACAGG CAATGAGCGA CGGCGGGACA CTGAAAATAA CCGCCCGAAG CAACGACAGT
GCGGCGCTAC TGGAGATCTC GGATCAGGGG CCCGGCATTC CGAAGGAAAT CCAGGACAAG
ATTTTCAACC TCTACTTCAC CACGAAGAAG ACGGGAACCG GCATCGGATT AGCTATGACA
TATCGCGTGA TGCAATTACA CAATGGCGCG CTTGAATTCG AAACTGAGCC GGGAAAGGGG
ACGACCTTCC GGCTCCAGGT GCCGCTGCGT CAATCGCAGA TCGACCAAAT TGACAATGCG
AACACCAGTG CACGTATTTC AGCCAACTTG GGTTGA
 
Protein sequence
MRRIRLKTKL VIAISAMVFA LVATLSYLYV SQLVLQRIRS AYNNGDFVAR EIRDAARDAV 
AVDLRNTDIN PSDSAKIRAV IADSLQTDPG VNTLLQSIVG YSPTTYDAGI YDRDDRVLVH
TDSSLLDKVV HSREDFAQVR DGSFFRQMNV VYGKPEVYDI HLPIQRDGKP FGDIRIGVST
VFLKSELRPQ LNRALTLSIV CVLVSFLLAA VLSNLALRPL EAIGRRLDQM TVDTGEAQPT
LDLRNDEYGA ITKIDRLGRE IRDVKEVFSA LKENLDQIMG TLQDGLMLFT RDWRVVLVSA
SAERFVGVPR GEMLGKHVEE VFTDHTKMGR IVLDAYALHQ SVPQREIEIE KGRRVQFALD
FIEERGQRIG ALITIRDAES VRRIENEIEL SRRLAAIGRL TSGVAHEVKN PINAIVVHLE
ILKNKLQEVA PDARRHMDII ENEIRRLDRV VQTLVDFTRP VELKLFDADL RKIAEEVALL
AGPEAANKNV HIEFNAVEKT LPVYVDTDLV KQAILNIVIN GVQAMSDGGT LKITARSNDS
AALLEISDQG PGIPKEIQDK IFNLYFTTKK TGTGIGLAMT YRVMQLHNGA LEFETEPGKG
TTFRLQVPLR QSQIDQIDNA NTSARISANL G