Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3260 |
Symbol | |
ID | 4072595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3862030 |
End bp | 3863124 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637985281 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_592335 |
Protein GI | 94970287 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.391924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGTTG CCTTAGTCGC ACCGCCTTTC ATACCAGTCC CTCCTCGCAA GTATGGCGGC ACCGAACTTT TCGTTGCGCA GTTAGCCGAG GGACTCAAGA AGCAAGGGAT CGATGTAGTG GTGTATGCCA ACGGGGAATC CACCGTTGAC ACGGAAGTGC GATCGCTCTA CGCGAAATCG CAGTGGCCTA TCGAAGGCGA AGTGTTTGCC AATCTCACGG ACATCAACCA CAGCGCGTGG GCGATTCGTG ATGCCTCCAA AGCCTGCGAC ATCATTCACG TGAACAGTGC TCCCGCGCTC GCCATGTCAC GCCTCGTCGA CGTGCCCATG GTCTACACCA TGCACCACGT CCACGACGAA CATCTCGCCA AGTTCTACGC CTACTATCCG GAGGTTGAGT TCGTTACCAT CAGCGACTTC CAGCGTCAAC GCGAGTCCAT GGCGAGAATG CGCACCATCC ACCATGGCCT CGACACCAAT CTCTACACCT GGAAGGATGG CAGGCGCGAA CACCTGAGCT TCCTCGGACG AATCGCCCCC ATGAAAGGCA CCCACCTCGC AATCGAGGTC GCGAAGCGTG CCGGAATCCC CTTAAAGATC GCCGGTGAAA TCCAGCCCTG CTACCGCGGC TACTGGGAAT CGCAGGTCAA ACCGCACGTC GATGGCAAGT TCATCGAATA CGTCGGCGAG GCCGACCTGC CGGCAAAGAA CGAGCTCCTC AAGAACTCCA TCGCCATGCT CTTCCCAATT CAGTGGCATG AACCTTTCGG CCTCGTAATG ATCGAAGCTA TGGCTTGCGG AGCACCCGTA CTCGCGCTGT CGGGCGGTGC GGTAGAAGAG GTTGTCTCGC ACGGCGTCGG CGGCTTCATC TGCAAAGACG TGGAAGATAT GGCTGCGCGC GCCAAAGACG CCAATAAGTT CGATCCCGCC CGCGTTCGCG AATACGTAGA ACGTGAGTTC TCGCTGGAAA AAATGGTTTC GCGTTACGCC GAGTTGTTCC GCGATGTCGT CGAGTCGCGC GCCCTCGCCG CACCCGAGGC CGAAGACATT GAACCGTTGA CGCAATTGTC AGGAGGGAAC ACTATCGCAG CATGA
|
Protein sequence | MRVALVAPPF IPVPPRKYGG TELFVAQLAE GLKKQGIDVV VYANGESTVD TEVRSLYAKS QWPIEGEVFA NLTDINHSAW AIRDASKACD IIHVNSAPAL AMSRLVDVPM VYTMHHVHDE HLAKFYAYYP EVEFVTISDF QRQRESMARM RTIHHGLDTN LYTWKDGRRE HLSFLGRIAP MKGTHLAIEV AKRAGIPLKI AGEIQPCYRG YWESQVKPHV DGKFIEYVGE ADLPAKNELL KNSIAMLFPI QWHEPFGLVM IEAMACGAPV LALSGGAVEE VVSHGVGGFI CKDVEDMAAR AKDANKFDPA RVREYVEREF SLEKMVSRYA ELFRDVVESR ALAAPEAEDI EPLTQLSGGN TIAA
|
| |