Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3241 |
Symbol | |
ID | 4072576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3838454 |
End bp | 3839158 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637985262 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_592316 |
Protein GI | 94970268 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.108692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCC GCCGCTGGAT CGCCGACGAA CACAAGGGCG ACACTGCCGC CCTAACCGGC ACCAACGCCG CGCATCTAGC ACGCGTTCTC CGCGCCCGAG TCGGCCAGCA ATTCGACATC TCGCTAGGCA CCCACATCCG CCGCGGCACC ATCACGTCAA TCGCGGAAGA CAGAGTCGAG TTCACCCTGG GCGAAGAACT CCCCTCCACC GCGATCACTC CCATCTCTCT CTACCTTGCT GTCTTTAAAT TCGACCGCCT CGAATGGGCG ATCGAAAAGT GCACCGAACT AGGCGTCGCA AAGATCATTC CGGTGATCGC CCGCCGCACC GAGCCCCATC TCGCCGCATC CGCCGCAAAG CGCGTAGAGC GCTGGCGCCG CATCGCGCTA GAAGCCGCGC AGCAATCCCG CCGCGCAGCT CCTCCCGAAA TCACCGAACC CGTGAAGCTC AAGCAGACGC TAGAAGCCGT CGGTCAGCGC ATCGTTCTAG CCGAAACCGA ACAGCAAAAC ATGTTGCGCG ATGTCTTGGA AGCGAGCGAG CAGAGCAGGG AAGTCTCGTT AGCCATCGGC CCCGAAGGCG GCTGGACCGA TGACGAACTC ACGCAATTCG ATCAATCAGG TTGGCAGCGC GCGTCCCTGG GCCCCACCAT CCTCCGAGCC GAAACCGCCT CCATCTCGGC CGTCGCCATC ACCCTGTCAT CCTGA
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Protein sequence | MTRRRWIADE HKGDTAALTG TNAAHLARVL RARVGQQFDI SLGTHIRRGT ITSIAEDRVE FTLGEELPST AITPISLYLA VFKFDRLEWA IEKCTELGVA KIIPVIARRT EPHLAASAAK RVERWRRIAL EAAQQSRRAA PPEITEPVKL KQTLEAVGQR IVLAETEQQN MLRDVLEASE QSREVSLAIG PEGGWTDDEL TQFDQSGWQR ASLGPTILRA ETASISAVAI TLSS
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