Gene Acid345_3241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3241 
Symbol 
ID4072576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3838454 
End bp3839158 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content63% 
IMG OID637985262 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_592316 
Protein GI94970268 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.108692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC GCCGCTGGAT CGCCGACGAA CACAAGGGCG ACACTGCCGC CCTAACCGGC 
ACCAACGCCG CGCATCTAGC ACGCGTTCTC CGCGCCCGAG TCGGCCAGCA ATTCGACATC
TCGCTAGGCA CCCACATCCG CCGCGGCACC ATCACGTCAA TCGCGGAAGA CAGAGTCGAG
TTCACCCTGG GCGAAGAACT CCCCTCCACC GCGATCACTC CCATCTCTCT CTACCTTGCT
GTCTTTAAAT TCGACCGCCT CGAATGGGCG ATCGAAAAGT GCACCGAACT AGGCGTCGCA
AAGATCATTC CGGTGATCGC CCGCCGCACC GAGCCCCATC TCGCCGCATC CGCCGCAAAG
CGCGTAGAGC GCTGGCGCCG CATCGCGCTA GAAGCCGCGC AGCAATCCCG CCGCGCAGCT
CCTCCCGAAA TCACCGAACC CGTGAAGCTC AAGCAGACGC TAGAAGCCGT CGGTCAGCGC
ATCGTTCTAG CCGAAACCGA ACAGCAAAAC ATGTTGCGCG ATGTCTTGGA AGCGAGCGAG
CAGAGCAGGG AAGTCTCGTT AGCCATCGGC CCCGAAGGCG GCTGGACCGA TGACGAACTC
ACGCAATTCG ATCAATCAGG TTGGCAGCGC GCGTCCCTGG GCCCCACCAT CCTCCGAGCC
GAAACCGCCT CCATCTCGGC CGTCGCCATC ACCCTGTCAT CCTGA
 
Protein sequence
MTRRRWIADE HKGDTAALTG TNAAHLARVL RARVGQQFDI SLGTHIRRGT ITSIAEDRVE 
FTLGEELPST AITPISLYLA VFKFDRLEWA IEKCTELGVA KIIPVIARRT EPHLAASAAK
RVERWRRIAL EAAQQSRRAA PPEITEPVKL KQTLEAVGQR IVLAETEQQN MLRDVLEASE
QSREVSLAIG PEGGWTDDEL TQFDQSGWQR ASLGPTILRA ETASISAVAI TLSS