Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3230 |
Symbol | |
ID | 4072565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3823425 |
End bp | 3827162 |
Gene Length | 3738 bp |
Protein Length | 1245 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637985251 |
Product | Ig-like, group 2 |
Protein accession | YP_592305 |
Protein GI | 94970257 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.16456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0136569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCTG TACTTCCGCG GTTGGCCGCC GTCGTGCGCC AAGCTTTTCG TTCTTCTGCT ATTTTCCAGA CAATCCCGGT GCTTCTGCTG GCAAGTGTGA CGGCGACGGC GCAGTCCGCC TCTTCTAACG TGCTCTTTTC CAATCCCAAT CCATCTCGTT ACGGGCAATC CGTTACGTTC ACGGACCAGG TGTTTTCAAC TGGATTAGCG CCGACCGGCA CGGTCACGTT CAACGACGGC GGATCGACGC TCGGAGCCGG AGCGGTCGCG ACGATCACTA CGGCCGACAA TTCGCTGGGC TTTTCGGAGA CTCCTGCGAG TTGGTTTAAG ACCGCCGGTG TAACTCTGAC TGCAAACGCT GGGGGTGCTC CGAACGGAAC GAACACTGCA ACCCAGGTTG TTTATAACGG CGCAGGAGCG GCGGGCAGTT ATCGCGTCTA TGTGAACTCT TCGCCGAACA CGCCGACGGT GTCCGGCCAG ACCTACACGG CATCGGTGTG GGTGAAGGCG GCGGCGCCGA TCGCGCTGCG AGTGTCAGCC AACGTGGGAA CGCCTGCTGC CTGCAATGTG ACGACAACGT GGACACGCTG TGCCGTGACA GCAACCGGCA ACGGGACTTC GCTGAAGCAA TTCCTGATCT ATTCGGCGGC CAGCAGTAAC GCAACGTTTT CGATATTCGT GTGGGGCGCG CAGTACGAAA CGGGAACCGT TACCGGGCCG TACGTCTCGA CTTCAGGAAC AGGCGTGACC AACGGGACGG CTTATGTGGC AGCCCTGACG ACCTCAGTAC TAACTGCGGG AGCGCATTCG ATCACCGCCG CCTACAGTGG AGATTCCAAT TTCAATCCGT CCACATCGCA AATCCTATTG CACACCGTCA ATTCAGGGAA TTCGTTTCAT GGCTTGTACG CGAGCGTGAA TCCGACTGCT TATGGTCAAT CCGTGACGTT CACGGACCAG GTGTTTTCGA ATGGAGCGGA GCCCACGGGC ACGATTACGT TCAACGATGG CGACTCAAGC ATCGGAGGCG GAGCGGTAAC AATCACAAGC GGCAACAACT CACTGGGTTA CTCTGAGTCA TCCGCGAGTT GGTTCAAGAC CGCCGGCGTG ACCCTGACTG CCAACGCTGG AGCGGCCCCG AACGGAACGA ATACTGCAAC CCAAGTTGCG TACAACGGCG CGGGAACCGC AGGGAGCTAT CGCGTCTATG CGAACTCCTC GCCGAACACG CCGACGGTAT CCGGGCAAAT CTACACGGCA TCGGTGTGGG TTAAGGCAAC GACACCGATT GCGCTACGAG TGTTCGCCAA CGTCGGCGCC GCCGCCCCAT GCAATGTGAC GACAACATGG ACACGCTGCG CCGTGACGGC AACGGGCAAC GGTACCGCGT TGAAACAGTT CCTGCTCTAT TCCGCGGCAA GCAGCAACAC CGCGTTCTCG ATCCTGATGT GGGGCGCGCA GTACGAAACA GGCAATGTCG CGGGCCCCTA CGTTGTGACG ACCGGAACTG GCGTGACAAA CGCAATTGCG TACACGGCAA CGCTTACAAC CCCAGTGTTG ACGGCAGGCA CGCATCCGAT CACCGGCGCT TATGATGGGG ATTCCAACTA TAGTCCGTCG AATTCACCGA CGATTTCTCA AGTTGTCGGC AAAGTGACGC CTACGGTGGC GCTCACTTGC TCTCCGAATC CGTCAGGAAA TGGGCAATCG GTGACTTGCA CGGCGACGCT TCCGAATAAC GCCGTGTCCG CCAACAGTGC AACGATTCAA TTCAAGGACA ACGGCAGCAA CCTTGGTTCT CCCATAGCGC CGCCTGACCT TAGCGCGACC TACACGACGA GCAATTTTTC CGTCGGCACG CACTCGATCG TGGCTGCGTA TAGCGGCAAT CTGAACTACA ACGCCGCGAA CTCGGCGACG GTGAGCCAGG TTGTTTCGTC GCAGGCGGCA CCGAGTATCA CCAGCTTGTC GGTGACATCC GGCGTGGTTG GGACCCTGGT GACGATCAAC GGAAACAACT TCGGATCAAC GCCTACGGTG ACGTTCTTTA ACGGCGTGAC GGCTGCGGTC ACTTCCTCGA GTGGAACGCA AATTCATACG TCAGTGCCAA ACGGCGCAAC GTCGGGGAAC GTGGTTGTAA CGACCACGTC CAATCTCATC AGCAATGGCA GGAACTTCAC GGTGCTGCCG ACACCGACGG TGAGCGGCGC GACGCCAATG TATGGCGTGG CAGGAGTGCC GGTTGTGATC TCCGGAACGA ACTTTGGAAA CACCCAGGGT GGGAGCCAGA TTTCGTTCAA TGGAACTCCG GCAACGGCGT CTAGTTGGGG TCCAAACCGG ATCGTAGTCC CAGTGCCTGC GGGAGCGCCG GCCGGCTCCG GCCCGCTGAC TCTGCGGGTG AGTGGGGTCA ACTTCAACCT TGGCACCTTC AAGGTGCAGA CTATTTCGAG CCTGGCTGTT TCTCCAACGT CTTTGACCTT GCCGCAAAAC AGCGTGCAGC GGTTCGTGGC GCTCGCGACG TATAGCGATG CCACAACCCA GAACATCACG CCTGCTGCGA CATGGACTTC TTCCAATACA TCCGTGTTGA CGGTCGATTC GACCGGACTC TACACGGCCG TCGGCCAGGG TCAATCGATG ATCCAGGCGA CTTATGGAGC GACGAGCAGT AATTTCGTCA CCGTCAATGT CGGTGCTCCG AGCTTCGTGC CGGTAGGTTC ACTCCACGAC GCGCGACAGA ACCACGCTGC CACACTGCTG CAAGACGGCA CTGTGCTGGT TACGGGTGGG CAAGGCAGTT CGAACGGCAG CGGATTCCCG CTTCTCCGTT CGGCCGAGCT TTACGATCCA GTGGCTACGT CGTTCACGCT GACCGGTGTA ATGAATCAAA CGCGCGAGTT CCACACGGCA ACGTTATTGT CCAACGGCAA GGTTTTGATT GCGGGTGGGC AAACGCAGGG CACGGGACTG TACATGTTGA CCGCGACGGC GGAGTTGTAC GATCCGTCCA CTTCGACGTT CACACCGACC GGCAAGTTGA ACCACCCGCG CGCTTTCCAT ACCGCAACGC TATTGAGCAA TGGACAGGTA CTCATCGCGG GCGGAGAGGA TGAGAACGGT CCATCAACGA GTGCGGAGTT GTACGATCCC GCGTCTGGAA GCTTCACACC GACCAACGGG AACATGACGA ATCCGGGAGG TGGGGCAGCG GTTGCTCTGA ACGATGGCAC AGTGCTCTTT ATCGAAGACG CGAGTGCAAC AGGCGTAAAT CTCGAAGTAT TCGATCCGGC AACTGGCATG TTCACGGCAA CGATCGCTAA CGGCTTCGCT GGCGATACCG CCGTGCTGCT CTCGTCCGGC AACGTTCTCA ACTATGGCCT CTCCATTTAT GACGGAGAGA GCGATGTGGA TATTCCATCG GCCCAGGTTT GCAACGCAGG CACGAAAGTC TTCTCGGCGG TCGGTGACCT GTCGGTGGCA CGCACTTCTT CGCCGGGAAC ACGGTTGAGC AACGGGAAGG TGGTCGTCAT CGGTGGGTTT AGCCAACAAG CGGGAGCGAT CGGAGACGCC GAGGTCTACG ATCCGACTTC GCAAACGTTT CTTGGGGCGG GCAGCCTCAA TACGCCGCGC TGGTTACACA CGGCCACGCT GCTGAATGAC GGAACGGTGC TTATCACCGG CGGTGCGGAG GATGCGGGGC CGCTGTCGAG CGCCGAGGTC TATCAAGCGG CGCCGTAA
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Protein sequence | MHAVLPRLAA VVRQAFRSSA IFQTIPVLLL ASVTATAQSA SSNVLFSNPN PSRYGQSVTF TDQVFSTGLA PTGTVTFNDG GSTLGAGAVA TITTADNSLG FSETPASWFK TAGVTLTANA GGAPNGTNTA TQVVYNGAGA AGSYRVYVNS SPNTPTVSGQ TYTASVWVKA AAPIALRVSA NVGTPAACNV TTTWTRCAVT ATGNGTSLKQ FLIYSAASSN ATFSIFVWGA QYETGTVTGP YVSTSGTGVT NGTAYVAALT TSVLTAGAHS ITAAYSGDSN FNPSTSQILL HTVNSGNSFH GLYASVNPTA YGQSVTFTDQ VFSNGAEPTG TITFNDGDSS IGGGAVTITS GNNSLGYSES SASWFKTAGV TLTANAGAAP NGTNTATQVA YNGAGTAGSY RVYANSSPNT PTVSGQIYTA SVWVKATTPI ALRVFANVGA AAPCNVTTTW TRCAVTATGN GTALKQFLLY SAASSNTAFS ILMWGAQYET GNVAGPYVVT TGTGVTNAIA YTATLTTPVL TAGTHPITGA YDGDSNYSPS NSPTISQVVG KVTPTVALTC SPNPSGNGQS VTCTATLPNN AVSANSATIQ FKDNGSNLGS PIAPPDLSAT YTTSNFSVGT HSIVAAYSGN LNYNAANSAT VSQVVSSQAA PSITSLSVTS GVVGTLVTIN GNNFGSTPTV TFFNGVTAAV TSSSGTQIHT SVPNGATSGN VVVTTTSNLI SNGRNFTVLP TPTVSGATPM YGVAGVPVVI SGTNFGNTQG GSQISFNGTP ATASSWGPNR IVVPVPAGAP AGSGPLTLRV SGVNFNLGTF KVQTISSLAV SPTSLTLPQN SVQRFVALAT YSDATTQNIT PAATWTSSNT SVLTVDSTGL YTAVGQGQSM IQATYGATSS NFVTVNVGAP SFVPVGSLHD ARQNHAATLL QDGTVLVTGG QGSSNGSGFP LLRSAELYDP VATSFTLTGV MNQTREFHTA TLLSNGKVLI AGGQTQGTGL YMLTATAELY DPSTSTFTPT GKLNHPRAFH TATLLSNGQV LIAGGEDENG PSTSAELYDP ASGSFTPTNG NMTNPGGGAA VALNDGTVLF IEDASATGVN LEVFDPATGM FTATIANGFA GDTAVLLSSG NVLNYGLSIY DGESDVDIPS AQVCNAGTKV FSAVGDLSVA RTSSPGTRLS NGKVVVIGGF SQQAGAIGDA EVYDPTSQTF LGAGSLNTPR WLHTATLLND GTVLITGGAE DAGPLSSAEV YQAAP
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