Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3193 |
Symbol | |
ID | 4070404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3778916 |
End bp | 3780709 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637985213 |
Product | parB-like partition proteins |
Protein accession | YP_592268 |
Protein GI | 94970220 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.101554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGTCG CTACCACCAT CCAGCCCGCG GCGCCGCCCG CAGCGCTACT CAACGATTCG AATGCCTACC AGCTCCTGCC GCTCGCGCAG GTAGTCCTCT CCAAAACAAA TCCGAAAGGC CGCTGCGAGG GCCCCGAGTT CGACGAGCTC GTCGCCTCCA TCCGACAGCA CGGCATTCTG CAGCCCATCC TTGTGCGTCC GGTGGGCGAG GAAGGCAAGT ACGAAATCGT CGCCGGCGAA CGCCGCTACA GTGCTGCCAA GGCCGCTGGG CGCGAAGATA TCCCCGCCGT CACTCGGCTG CTCAGTGATC GCGAAGCCCA CGAGCTGCAA CTGATAGAGA ACCTGCAGCG CAAGGACGTG ACCGCGCTCG AAGAGGCCGA GGGTTTTCGA AACCTGCTCC AGTCGCTGAA TGCGGAGCGG AAGGATGGGC GGCAGGAAGA GCTTGTCAAA GAGATTGCCA GCCGCGTGAA TAAGAGCGTG CGCCATGTGT ATTCGCGCAT GAAGCTCACA GAGTTGACCA AGGATGCGGC CTCGCTGCTC GCGATTGGGA AGATCGGTTC GAGTCACGCG GATGAAATTG TTCGCCTCAC GCCAGACGAC CAGGTCGATC TGCTGAAGAA GCACCTCGAG CGGGAGGAAT GGGTTGGCGA AAAGCGCCAG AAGGTCGTTC TTAGCGTCCG GCAGCTTAGG ACTGTCATCG AGAATAACTA CCAGCTTGAC CTCTCGACCG CGCCGTTCAA GCTCGATGAC GACCGCGTAA AGCCTGCCTG CTCTGGATGC CCCAAGAACA CTGCCAACGC GCCTCTTCTC TATCCGGATT TGAAAAAGGC GAAGTGCACG GACGTCTCCT GTTTCCAGCG CAAGGTAAAG GGTTTCGTCC AGATCGAAGT TAAAGCTCTT GCGAAAGATG TGAAGGTTCA GGTTCCGATC GTTGTGACGG CTGCGTGGTG GTGTAACGGT GATCAGAAAG CAAAGACGAA GGGAGCCTGG GCAGAAGCGC AAATAGGAAG CTGCGCGCAT ATACAGGCCG CCACCGTCGT TGATGAGTTT GCCCGGCCTG TGGGCGCAAA GCTCGTTTGC GCGAACATGG GCTGTTTAGT CCATTTTCCC AATCAGAAGA AAAACTCGTC GGGTGGATCG ACGTCGCGCT CGAAGAAATC AGTGGCGAAG CAGAAAGATC TCGATAAGAA AAGGCTCCTC GATAGGGAGC TCGAGGTCGC GCCTGACATC GCCGTGTTTC GAGCGGTACT CGATAAGGTT GCTGAGCCTT CTAGCGTGGA ATTGGGCGTA ATAACTGACT GGCTCCTCGG CGCGTACGGC GCAACGAAAG AAGGAGAGGA TGCGCTCCTC GATTATTTCG CTTGGCCCAA AGGTCAGGGG ATGGCTTTCG ACCGTCTCCG GAAGCTGCAT GAGAAGCACG CAACCGGCTT CAATTTCCGA AAGGGCGTGA AGTTCATCAT TGCCGCCATT ATCGCCGACG GGATCGGCGC CGGAGGCGGT TCGGAACTTG ATGATGTTGC CAAGAAATAC AACCTCGATG TGAAGTCCAT CCGTGCTAAG GCGCTCGCGG ATGCGAAGCA GAAGCAAGCA CTGAGCTCCC CCAAGGCGGG AGCGAACGGC GCGGCTGGCA AGGTGGCCCC TCAGGGTGCC TCGGAGACCG GAACCTCCAA AGCTGCCGCG AAGAAGTCTC CCGCCAAAAC TTCCCCTAAG AAAGCCGCGA AGAAAGCTAC CCCTAAGAAG GCGGCCTCCG CTTCGAAGCC GAAGAACCTG TCGGCGAAGA AGGGAGGCCG CTAG
|
Protein sequence | MSVATTIQPA APPAALLNDS NAYQLLPLAQ VVLSKTNPKG RCEGPEFDEL VASIRQHGIL QPILVRPVGE EGKYEIVAGE RRYSAAKAAG REDIPAVTRL LSDREAHELQ LIENLQRKDV TALEEAEGFR NLLQSLNAER KDGRQEELVK EIASRVNKSV RHVYSRMKLT ELTKDAASLL AIGKIGSSHA DEIVRLTPDD QVDLLKKHLE REEWVGEKRQ KVVLSVRQLR TVIENNYQLD LSTAPFKLDD DRVKPACSGC PKNTANAPLL YPDLKKAKCT DVSCFQRKVK GFVQIEVKAL AKDVKVQVPI VVTAAWWCNG DQKAKTKGAW AEAQIGSCAH IQAATVVDEF ARPVGAKLVC ANMGCLVHFP NQKKNSSGGS TSRSKKSVAK QKDLDKKRLL DRELEVAPDI AVFRAVLDKV AEPSSVELGV ITDWLLGAYG ATKEGEDALL DYFAWPKGQG MAFDRLRKLH EKHATGFNFR KGVKFIIAAI IADGIGAGGG SELDDVAKKY NLDVKSIRAK ALADAKQKQA LSSPKAGANG AAGKVAPQGA SETGTSKAAA KKSPAKTSPK KAAKKATPKK AASASKPKNL SAKKGGR
|
| |