Gene Acid345_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3193 
Symbol 
ID4070404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3778916 
End bp3780709 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content58% 
IMG OID637985213 
ProductparB-like partition proteins 
Protein accessionYP_592268 
Protein GI94970220 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.101554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCG CTACCACCAT CCAGCCCGCG GCGCCGCCCG CAGCGCTACT CAACGATTCG 
AATGCCTACC AGCTCCTGCC GCTCGCGCAG GTAGTCCTCT CCAAAACAAA TCCGAAAGGC
CGCTGCGAGG GCCCCGAGTT CGACGAGCTC GTCGCCTCCA TCCGACAGCA CGGCATTCTG
CAGCCCATCC TTGTGCGTCC GGTGGGCGAG GAAGGCAAGT ACGAAATCGT CGCCGGCGAA
CGCCGCTACA GTGCTGCCAA GGCCGCTGGG CGCGAAGATA TCCCCGCCGT CACTCGGCTG
CTCAGTGATC GCGAAGCCCA CGAGCTGCAA CTGATAGAGA ACCTGCAGCG CAAGGACGTG
ACCGCGCTCG AAGAGGCCGA GGGTTTTCGA AACCTGCTCC AGTCGCTGAA TGCGGAGCGG
AAGGATGGGC GGCAGGAAGA GCTTGTCAAA GAGATTGCCA GCCGCGTGAA TAAGAGCGTG
CGCCATGTGT ATTCGCGCAT GAAGCTCACA GAGTTGACCA AGGATGCGGC CTCGCTGCTC
GCGATTGGGA AGATCGGTTC GAGTCACGCG GATGAAATTG TTCGCCTCAC GCCAGACGAC
CAGGTCGATC TGCTGAAGAA GCACCTCGAG CGGGAGGAAT GGGTTGGCGA AAAGCGCCAG
AAGGTCGTTC TTAGCGTCCG GCAGCTTAGG ACTGTCATCG AGAATAACTA CCAGCTTGAC
CTCTCGACCG CGCCGTTCAA GCTCGATGAC GACCGCGTAA AGCCTGCCTG CTCTGGATGC
CCCAAGAACA CTGCCAACGC GCCTCTTCTC TATCCGGATT TGAAAAAGGC GAAGTGCACG
GACGTCTCCT GTTTCCAGCG CAAGGTAAAG GGTTTCGTCC AGATCGAAGT TAAAGCTCTT
GCGAAAGATG TGAAGGTTCA GGTTCCGATC GTTGTGACGG CTGCGTGGTG GTGTAACGGT
GATCAGAAAG CAAAGACGAA GGGAGCCTGG GCAGAAGCGC AAATAGGAAG CTGCGCGCAT
ATACAGGCCG CCACCGTCGT TGATGAGTTT GCCCGGCCTG TGGGCGCAAA GCTCGTTTGC
GCGAACATGG GCTGTTTAGT CCATTTTCCC AATCAGAAGA AAAACTCGTC GGGTGGATCG
ACGTCGCGCT CGAAGAAATC AGTGGCGAAG CAGAAAGATC TCGATAAGAA AAGGCTCCTC
GATAGGGAGC TCGAGGTCGC GCCTGACATC GCCGTGTTTC GAGCGGTACT CGATAAGGTT
GCTGAGCCTT CTAGCGTGGA ATTGGGCGTA ATAACTGACT GGCTCCTCGG CGCGTACGGC
GCAACGAAAG AAGGAGAGGA TGCGCTCCTC GATTATTTCG CTTGGCCCAA AGGTCAGGGG
ATGGCTTTCG ACCGTCTCCG GAAGCTGCAT GAGAAGCACG CAACCGGCTT CAATTTCCGA
AAGGGCGTGA AGTTCATCAT TGCCGCCATT ATCGCCGACG GGATCGGCGC CGGAGGCGGT
TCGGAACTTG ATGATGTTGC CAAGAAATAC AACCTCGATG TGAAGTCCAT CCGTGCTAAG
GCGCTCGCGG ATGCGAAGCA GAAGCAAGCA CTGAGCTCCC CCAAGGCGGG AGCGAACGGC
GCGGCTGGCA AGGTGGCCCC TCAGGGTGCC TCGGAGACCG GAACCTCCAA AGCTGCCGCG
AAGAAGTCTC CCGCCAAAAC TTCCCCTAAG AAAGCCGCGA AGAAAGCTAC CCCTAAGAAG
GCGGCCTCCG CTTCGAAGCC GAAGAACCTG TCGGCGAAGA AGGGAGGCCG CTAG
 
Protein sequence
MSVATTIQPA APPAALLNDS NAYQLLPLAQ VVLSKTNPKG RCEGPEFDEL VASIRQHGIL 
QPILVRPVGE EGKYEIVAGE RRYSAAKAAG REDIPAVTRL LSDREAHELQ LIENLQRKDV
TALEEAEGFR NLLQSLNAER KDGRQEELVK EIASRVNKSV RHVYSRMKLT ELTKDAASLL
AIGKIGSSHA DEIVRLTPDD QVDLLKKHLE REEWVGEKRQ KVVLSVRQLR TVIENNYQLD
LSTAPFKLDD DRVKPACSGC PKNTANAPLL YPDLKKAKCT DVSCFQRKVK GFVQIEVKAL
AKDVKVQVPI VVTAAWWCNG DQKAKTKGAW AEAQIGSCAH IQAATVVDEF ARPVGAKLVC
ANMGCLVHFP NQKKNSSGGS TSRSKKSVAK QKDLDKKRLL DRELEVAPDI AVFRAVLDKV
AEPSSVELGV ITDWLLGAYG ATKEGEDALL DYFAWPKGQG MAFDRLRKLH EKHATGFNFR
KGVKFIIAAI IADGIGAGGG SELDDVAKKY NLDVKSIRAK ALADAKQKQA LSSPKAGANG
AAGKVAPQGA SETGTSKAAA KKSPAKTSPK KAAKKATPKK AASASKPKNL SAKKGGR