| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3126 |
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| Symbol | |
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| ID | 4070240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3717583 |
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| End bp | 3719484 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637985145 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_592201 |
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| Protein GI | 94970153 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.503601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATGA AGCAAAGAGC TTGGGCTGTC GGGCTATTTC AAATCGTCCT CGTCGTCTGT
TCACTATTCG CGGCCTGGGC CTTACGATTC GACTTCCGAC TGCCACACCT GGAATACGTA
CTCCAGGCAC TGCCGATACT CATCGTCCTG CGGCTGGCTG CATTTGCGCG CTTCAACCTT
TTTCATGGGT ACTGGAGATA TACCGGCGTT AACGACGCCC TCGATATCGC CAAGGCGGTT
TCGACCAGTT CGATCGTCTT TGCCATTGTT ATCCGGTACT TACTCGGAAA TAGCCACTTT
CCAATTTCGG TTTATCTGCT CGAAGCCGCG CTATCGCTTC TGCTTCTGTG CGGCGTTCGG
GTCGCTTCGC GAGCCATGAT GGAATCGGCG ATGCGCGAGG CCCAATCCAC CGGTAAGGGC
GTCGTGATCG TGGGTGCCGG GTTTGCCGGC CAACTCCTCG TCCGTGAGCT ACAGCGTCCC
GAGAGCGGCT TCCGTCCCGT CGCTTTTGTC GATGATGACC CACGTAAGCA GGGAGTGAAG
ATCCAGGGGC TGCCGATCGC CGGAACGGTG GAAGAACTCT CGAGGGTGTT GCGGGAATTC
GGCGCGACTG AAGTGCTGAT TGCCATTCCG AGCGCGAACG CCGCCGAAAT GCGACGGATC
GTCCAGATCT GTTCCAACGC CCGGGTCGGG TTCAAGACTA TCCCGAGCCT GGGAGAACTT
GCGTCCGGCA ACGTCGGCGT TACCGAACTT CGGTCGGTAA ACCTCGAAGA CCTACTCGGT
CGCGAGCCGG TCAAGCAGGA CCTCGAAGCC GTCCGCGACG TGCTGAGCGG CGCGGTGGTG
ATGGTAACGG GCGCTGCCGG ATCCATCGGT TCCGAACTAT GCCGCCAGAT CCAGGGCTAC
GGGCCGTCTC TGCTGATTTG CGTTGACCAG AACGAGACCG GTTTGTTCAA CCTGCAACAG
GAGTTGCTGG ATTTCCCGAA CCCGCATGCG GCGGCGTTTT TCGTAGCCGA CGTCGGCGAC
GCTCCGCGAA TGCGTCATCT CTTCCAGCGC TACCGGGTTG ACTACGTATT CCATGCCGCG
GCATACAAGC ACGTTCCGCT GATGGAAGAC AATCCGCGGG AAGCGATCCA GAACAACGTT
GTCGCCCTGC GAGATTTAAT GCGGATCGCC GATAAAGCCG GTTGCAAGCG GTTCCTGCTG
ATCTCCTCCG ACAAGGCCGT CAATCCGAGC AGCCTGATGG GCTGCACCAA GCGTGTCGGT
GAACTTCTCC TCGGGTCGTG GCCAACCACA GGCATGGATT GCGTGTCGGT GCGCTTCGGC
AACGTGCTGG GATCCCAGGG CAGTGTCATT CCGCTCTTCC AGCAGCAGAT TACGCGCCAC
CGCCGAATCA CGGTGACGCA CAAAGACATC ACGCGCTTCT TCATGACCAT TCCCGAGGCG
GTTGCCCTGG TGCTTCAAGG CTTCACCGTG GGTAGCCATG GCGACATCCT GGTGCTGGAT
ATGGGCGAGG CGATCCGAAT CGTGGACATG GCGAAGGCGC TGATTCGCCT CTCCGGCAAG
TCTGAGGAAG ACGTAGAAAT CGTCTTCACC GGTCTGCGTC CGGGCGAGAA GCTCTACGAA
GAACTGTTCT ATGCCCACGA GTCTGTCGAG CCCACCGACG TTCCGAAGGT GCAGAAGACG
CGTGGCCAGA TGATTGCGAC CGAGAAACTT GCCCATATGA TCGATGAATT GGAAGGGCTG
ATACAGACGG AGCGGGAAGA TGCGGTCCGC GCCAAGATGA AGCAGATCGT TCCGCAATAC
ATGTATGCGC CGGTCCGCGA GTATGCAAAG CCGCCGGTTC GTGCCTTCGA GGTCATGCGC
GGCAAAGACA TGTCATCGCA CAAGGCAGCC TCCGCCGACT AA
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| Protein sequence | MFMKQRAWAV GLFQIVLVVC SLFAAWALRF DFRLPHLEYV LQALPILIVL RLAAFARFNL
FHGYWRYTGV NDALDIAKAV STSSIVFAIV IRYLLGNSHF PISVYLLEAA LSLLLLCGVR
VASRAMMESA MREAQSTGKG VVIVGAGFAG QLLVRELQRP ESGFRPVAFV DDDPRKQGVK
IQGLPIAGTV EELSRVLREF GATEVLIAIP SANAAEMRRI VQICSNARVG FKTIPSLGEL
ASGNVGVTEL RSVNLEDLLG REPVKQDLEA VRDVLSGAVV MVTGAAGSIG SELCRQIQGY
GPSLLICVDQ NETGLFNLQQ ELLDFPNPHA AAFFVADVGD APRMRHLFQR YRVDYVFHAA
AYKHVPLMED NPREAIQNNV VALRDLMRIA DKAGCKRFLL ISSDKAVNPS SLMGCTKRVG
ELLLGSWPTT GMDCVSVRFG NVLGSQGSVI PLFQQQITRH RRITVTHKDI TRFFMTIPEA
VALVLQGFTV GSHGDILVLD MGEAIRIVDM AKALIRLSGK SEEDVEIVFT GLRPGEKLYE
ELFYAHESVE PTDVPKVQKT RGQMIATEKL AHMIDELEGL IQTEREDAVR AKMKQIVPQY
MYAPVREYAK PPVRAFEVMR GKDMSSHKAA SAD
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