Gene Acid345_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3118 
Symbol 
ID4070232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3707723 
End bp3708451 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content59% 
IMG OID637985137 
ProductOmpA/MotB family outer membrane protein 
Protein accessionYP_592193 
Protein GI94970145 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGA TTTCGATGGT AGCAGTTCTG ATTGCAGGCG TAATGCCCTT CACCGTGGGC 
TGCGCAACGA AGAAGTACAC CCGCGAGCAA GCTGCGCCGA TTATCAACAA GACCAATGAA
TTAGATGATC TGACGGCCAA GAATAGTCGC GATATTAAGG ACACGGATCG TCGCGCGCAG
TCCGGAATTG CCGACGCCCA GGCGAAGGCC ACCACCGCCG ACCAGCATGC AGTGCAGGCT
GGCCAGCAGG CCGATGCAGC CAACAAGAAT GCCACCCAAG TGAACGGGCA GGTTGCGTCA
CTCGCCGGTA CGGTGGAGAA CCTCGACAAT TACAAGCCGG TGGCCGAGAG CTCGGTGCAC
TTCGGCTTCG ATAAGGCTGA CCTGACCAAG AAGGCGAAGG ACGCCCTTGA CCAGCTTGGG
GGACAGTTTT CGAGCACCAA GCACTTCATC ATCGAAGTGG AAGGCAGCAC CGATTCGACT
GGCGATGCCG ACTACAACTA TCAGCTGAGC AAGCGCCGCG CCGATGCGGT GATCCAGTAC
CTGGCGGACA AGTACCAGAT TCCAGCGCAC AAGATCTACT TGATCGGCCT GGGCAAGGAC
AAGCCGGTGG AGAAGAATGC CACCAGCGAA GGCCGCGCCA AGAACCGCCG CGTGGATGTC
CGCTTGATGA CCAACACCGG CGACCAGCAG CAGAACGCTT CTGCGAACAC ACCGCAGGGC
GGAAAGTAA
 
Protein sequence
MNRISMVAVL IAGVMPFTVG CATKKYTREQ AAPIINKTNE LDDLTAKNSR DIKDTDRRAQ 
SGIADAQAKA TTADQHAVQA GQQADAANKN ATQVNGQVAS LAGTVENLDN YKPVAESSVH
FGFDKADLTK KAKDALDQLG GQFSSTKHFI IEVEGSTDST GDADYNYQLS KRRADAVIQY
LADKYQIPAH KIYLIGLGKD KPVEKNATSE GRAKNRRVDV RLMTNTGDQQ QNASANTPQG
GK