| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3110 |
|---|
| Symbol | |
|---|
| ID | 4070224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3695932 |
|---|
| End bp | 3696954 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637985129 |
|---|
| Product | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase |
|---|
| Protein accession | YP_592185 |
|---|
| Protein GI | 94970137 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.508417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCTG CAGCCACAGA ATCGGAAATC AACCACGTGA TCGACCGGGT GAAAGAGCTC
GGCTACCAGG CGCACGTAAC GCGTGGCACC GAGAAGACGA TCGTCGCCGC CGTTGGGAGT
TCCGGCAACC GCGAACAACT GGCGGCGCTG GAGGCCGCGC CGGGCGTGGA GAACGTGGTC
GTCATCGCGC ACCCATTCAA GCTCGTCAGT ATGCAGGTGA AACAGAAACG GACCGTGGTG
AACGTGGGCG GCGTGCCGAT TGGCGGTGAG GCTTGCGTGC TTATGGCGGG GCCGTGCTCG
GTGGAGTCGC GAGAGCAATT GATGACCGTG GCCCATGCGA TCGCGGCGGC CGGGGCAACG
ATGCTGCGCG GCGGCGCATA TAAGCCGCGG ACCTCGCCGT ACGAGTTCCA GGGGCTGGGG
ACGGAGGCGC TGAAGCTGCT GCGCGAAGCG TCCGAGGCAA CGGGTCTGCC GGTCGTCACA
GAAGTGATGA GCACCGAGGA TGTGGACCTG GTGGCGGAGT ACGCGGACAT GCTGCAGGTG
GGCGCGCGCA ATATGCAGAA TTTCTCGCTG CTGCGACGAT TGGCGAAATG CGAGCGGCCG
ATTTTGCTGA AGCGGGCGCC GTCGGCAACA GTGAAGGATT GGCTGCTGGC GGCGGAGTAT
CTGCTGGCGG GCGGCAATAG CCAGGTGGTG CTGTGCGAGC GCGGGATTCG CTCGTACGAT
CCCGACATGC GAAACACGTT CGACCTGGCG GCGATTGCGC TGGCGAAACA GTTGTCGCAC
TTGCCGGTTG TCGCCGATCC GTCGCATGGG ACCGGACGAC GCGATCTGGT GCCGATCATG
GCGCGCGCGG CGGTGGCGGT TGGCGCGGAT GGCGTGATCG TCGAAGTGCA TCCGTGCCCG
GAGAAGGCGC TGTCGGACGG ACCGCAATCG CTGACCCTGC CGGAGTTCGA GAAGATGGTG
CAGTTGCTGG GGCAGCCGCT GCGTAGGCAT CTGCGGCAGG AATTGAAGGC GGCGACAGCG
TAG
|
|---|
| Protein sequence | MSSAATESEI NHVIDRVKEL GYQAHVTRGT EKTIVAAVGS SGNREQLAAL EAAPGVENVV
VIAHPFKLVS MQVKQKRTVV NVGGVPIGGE ACVLMAGPCS VESREQLMTV AHAIAAAGAT
MLRGGAYKPR TSPYEFQGLG TEALKLLREA SEATGLPVVT EVMSTEDVDL VAEYADMLQV
GARNMQNFSL LRRLAKCERP ILLKRAPSAT VKDWLLAAEY LLAGGNSQVV LCERGIRSYD
PDMRNTFDLA AIALAKQLSH LPVVADPSHG TGRRDLVPIM ARAAVAVGAD GVIVEVHPCP
EKALSDGPQS LTLPEFEKMV QLLGQPLRRH LRQELKAATA
|
|---|
| |