Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3094 |
Symbol | |
ID | 4072658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3676184 |
End bp | 3677782 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985113 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_592169 |
Protein GI | 94970121 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGCAA CAACTGCGCC TCCGGGCGTT TTGGCAACAG AGGCAGGCGG CGTTCGCGAA ATCAATCCGT GGTGGGTAAC CGCCGCGGTG ATGATGGCCG TTTTCATGGA GGTGCTCGAC ACCACCATCG TCAACGTGTC GCTGCCGCAC ATTGCGGGAA ATCTCTCCGC CAGCGTTGAC GAGTCAACGT GGGTCCTCAC CTCGTATCTC GTCGCCAACG CCATCATCCT TCCCATGACG GGATGGCTTG CGAACCACTT CGGCCGCAAG CGCATCCTCA TGTCTTCCAT CATCGGCTTC ACGCTCGCTT CCGTCGCGTG CGGCATGGCG CCAAACCTGT CATCGCTGAT CTTCTTCCGC GTCGTGCAAG GCGCCACCGG TGGAGGTCTC CAACCGCTCT CCCAAGCCAT CATGCTCGAG GCCTTCCCTG GCAAGAAGCG CGGGAAGGCG ATGGCCATCT GGGCCCTCGG CATCGTCGTC GCTCCCATGC TTGGCCCCAT GCTCGGCGGC TGGATCACCG ACAGTTATAG CTGGCGCTGG ATCTTCTACA TCAACTTGCC CGTCGGCTTG CTCGCCACCA TGATGTCGCA GTGGTTCATC TTCGACCCGC CCTACATCAA ACGCTCGTCT GACGTCGTGG ATTACTGGGG AATCGGCTTC TTAATCGTCG GCATTGGTTC ACTTCAGGTC ATGCTCGACA AGGGCCAGGA AGACGACTGG TTCGGCTCGC ACTTCATCAC CACCCTCGCC GTGCTCACGG TTGTCGGCTT GATCTTGTTC ATCATGCGCG AACTCATGGC GGAGCACCCC ATCGTAGACC TGCGTGTCTT TAGAGTGCGA ACCTATGCCA CCGGTGTCTT TCTCATGACG ATTCTCGGCT TCGTGCTCTA CGGCAGCACG GTGCTGATCC CCATCTGGCT ACAAACACTC ATGGGCTATA GCTCGCTCGA AGCCGGATTC GCCGTCCTCC CAAGAGGTCT CGGGTCGTTC CTCTTCATGC CTCTAGTCGG CGTGCTCATG GGATTTGTCG AGCCACGCAA GCTCTTAGCC ACTGGCCTGA TCACCGCCGG CGGCAGCCTC TACTTCTTAT CGTTGTTGAA TACCCAGGCC GGATATTGGG ACTTCTTCTG GCCGCAACTC ATCCAGGGCG CCGCCATGGG CCTCCTCTTC GTCCCGCTCA CGACGATCAC CAACGATCCC ATCGCCCCCG AAAACATGGG CAACGCCACC AGCATCTTCA ACCTCATGCG CAACATCGGC GGCAGCATCG GGATCGCCAT GACGACCACG ATCGTCGCGC GCAGCCAGCA GCTCCACTAC AACAACCTCG TCCACAACAT GAGCTCGTAC AACCCCAAGG TCCAGCAAAT GATGGCCGGC GCACGTGGCA TGTTCATGTC GAAAGGCATG GACGCCCATT CCGCCGGCCT GCAGGCCTAC CACTCCCTGT GGGGCATGGT CATGCAGCAG GCCATGATGC TCTCGTTCAT CCGCGCCTTC CAAATCCTCT CCGGGCTCTT TTTCATTTGC CTCCCGCTAA TCCTCCTAAT GCGCAAACCC AAGCACAACG AAAAAGGCGG CGGAGGCATG GCCCACTAA
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Protein sequence | MSATTAPPGV LATEAGGVRE INPWWVTAAV MMAVFMEVLD TTIVNVSLPH IAGNLSASVD ESTWVLTSYL VANAIILPMT GWLANHFGRK RILMSSIIGF TLASVACGMA PNLSSLIFFR VVQGATGGGL QPLSQAIMLE AFPGKKRGKA MAIWALGIVV APMLGPMLGG WITDSYSWRW IFYINLPVGL LATMMSQWFI FDPPYIKRSS DVVDYWGIGF LIVGIGSLQV MLDKGQEDDW FGSHFITTLA VLTVVGLILF IMRELMAEHP IVDLRVFRVR TYATGVFLMT ILGFVLYGST VLIPIWLQTL MGYSSLEAGF AVLPRGLGSF LFMPLVGVLM GFVEPRKLLA TGLITAGGSL YFLSLLNTQA GYWDFFWPQL IQGAAMGLLF VPLTTITNDP IAPENMGNAT SIFNLMRNIG GSIGIAMTTT IVARSQQLHY NNLVHNMSSY NPKVQQMMAG ARGMFMSKGM DAHSAGLQAY HSLWGMVMQQ AMMLSFIRAF QILSGLFFIC LPLILLMRKP KHNEKGGGGM AH
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