Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3089 |
Symbol | |
ID | 4072653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3671531 |
End bp | 3672115 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637985108 |
Product | TetR family transcriptional regulator |
Protein accession | YP_592164 |
Protein GI | 94970116 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.544244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACCA AGACTTCCAA GCCCGCGCCT CGCAAGCCCC GCACGGACGC GCTCCGCAAT CGCGAGCGCC TCCTCGAAAT CGCCAAAGAG GCCTTCACCC GCCATGGCGC CGACGCCAGT CTCGACGACA TCGCCAAAGA AGCCGGCGTT GGACCGGGTA CGCTCTACCG ACACTTTCCT ACCCGCGATG ACCTGATCTG CGCGGTCTAT CAGAGCGAGG TCGAGAAGCT CGCCGCCGCC GAGCGTCGCT TCAGCGAAAC CAAGCCCCCG GTCGACGCCC TGCGCGCGTG GATGCTGCTC TTCGTGGATT ACATCGCCGC CAAGCACATC ATCGCTCCTG CGCTAAACTC GATGGTCGGC GGTCCCTCGA AGCTCTATGA ATGTTCGCGC GGCCTCATCG AGGGCGCCAT CAACTCTCTC GTGAAACGAG CTGTCGAGAG TGGCGACATC CGCAAAGACA TCGTGCCCTT CGATCTCCTC CGCGCGCTCA TCGGAGTCGC CAACGTCGCC ACCACCCCCG ATTGGCAACA AAGCGCCAAG CGCCTGGTAG ACATCCTCAT CACCGGCTCG CGCCCCGCAC GCTAG
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Protein sequence | MPTKTSKPAP RKPRTDALRN RERLLEIAKE AFTRHGADAS LDDIAKEAGV GPGTLYRHFP TRDDLICAVY QSEVEKLAAA ERRFSETKPP VDALRAWMLL FVDYIAAKHI IAPALNSMVG GPSKLYECSR GLIEGAINSL VKRAVESGDI RKDIVPFDLL RALIGVANVA TTPDWQQSAK RLVDILITGS RPAR
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