| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3067 |
|---|
| Symbol | |
|---|
| ID | 4071974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3645162 |
|---|
| End bp | 3645491 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637985086 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_592142 |
|---|
| Protein GI | 94970094 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin
[TIGR01126] protein disulfide-isomerase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.788534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTG ACACGATCGT AGAAGTAACA GATTCGAATT TTGACCAATT AGTTCTGAAA
TCCGATAAAC CCGTCCTCAT TGATTTCTGG GCAGCATGGT GCGGTCCCTG TAAGGCACTC
GCCCCGATCG TGGACGAAGT GGCGCAGTCG TATAACGGCA AAGTAACGGT CGGCAAAATG
GACGTCGACA AGAACGCCGC GACCCCGTCC CGCTACGGCA TCCGTGGCAT CCCCACCCTT
CTGCTCTTCA AGGGCGGCCA GGTGCAGGAA CAAATCGTCG GCTACGTGGC CCGCGAGCGC
ATCGAGCAGG CGATCAACAA AGCCCTCTAA
|
|---|
| Protein sequence | MATDTIVEVT DSNFDQLVLK SDKPVLIDFW AAWCGPCKAL APIVDEVAQS YNGKVTVGKM
DVDKNAATPS RYGIRGIPTL LLFKGGQVQE QIVGYVARER IEQAINKAL
|
|---|
| |