Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3057 |
Symbol | |
ID | 4071964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3632983 |
End bp | 3633696 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985076 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_592132 |
Protein GI | 94970084 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.928441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGATGA ACGTCGCGCT TCCCGACGTC AGAAATTCCG TAAACGGCTG GCACGCCATC GCCGCCGTCA TTGACCACAC ATTATTAAAG CCAGAAGCGA CCCGCGAGGA AGTCACACGC CTGTGCGAAG AAGCACTGCG TTATGAATTC TTTTCGGTGA TGGTGAATCC CGACCTGCTG GCGCATGCCA AAAGCGTGGT GCGCGGCGCG CGAGTCAAAG TGGGGACGAC CATTGGATTC CCACTGGGTG CGACGTTGAC CACGGTGAAA TTGTTCGAGG CCGCGGAGGC GCTGAAACTT GGCGCGCAGG AACTCGACAT GGTGATCCCG ATCGGCGCGG TGAAGGCTGG TGAACGGCAC TTGATCCAGG CGGAGATCCG AAGCCTGGCG CAATTGGCCC ATGATGGTGG AGCGATCCTG AAGGTCATCA TTGAGACGGC GTTTCTGAGC GACAAAGAGA AGATATTTGC TTGCGCGCTG GCGATGGAAG GTGGCGCGGA CTTCGTGAAG ACCTCAACGG GCTTCAGCAA GGCTGGCGCG ACTGCAAGCG ACGTTCACCT GATGCGCGGC GTGGTGGGAA CCAAACTCGG CGTGAAGGCA GCGGGCGGAA TTCGTACGCT AGCGGACGCC GAAGCGATGC TCGAGGCCGG CGCCAATCGT ATCGGTTCCA GCGCGAGTGT GGCAATCGTA CGGGAACTGG GTGCGCCCGA ATAA
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Protein sequence | MVMNVALPDV RNSVNGWHAI AAVIDHTLLK PEATREEVTR LCEEALRYEF FSVMVNPDLL AHAKSVVRGA RVKVGTTIGF PLGATLTTVK LFEAAEALKL GAQELDMVIP IGAVKAGERH LIQAEIRSLA QLAHDGGAIL KVIIETAFLS DKEKIFACAL AMEGGADFVK TSTGFSKAGA TASDVHLMRG VVGTKLGVKA AGGIRTLADA EAMLEAGANR IGSSASVAIV RELGAPE
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