| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3041 |
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| Symbol | |
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| ID | 4071948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3610157 |
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| End bp | 3612691 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637985060 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_592116 |
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| Protein GI | 94970068 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0235871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGATG TACGCCTCGC TTTTCGTCAG TTCCTGAAGT CGCCGGGATT TGTGTTCACC
GTAGTGCTGA CGATCGCGCT GGGAATTGGC GCCAACACGG CGATCTTCAC TCTGGTTCAT
GCGGTGCTGT TGAAGTCTCT GCCCGTGGTG GATCCCAATA CTCTGTATCG AATTGGCGAC
AAGGACGACT GCTGCGTGAA TGGCGGCTTC ATGGGCGACG ATGGCGACTT CGACTTGTTC
TCATACGACC TCTACACGAG CCTCCGCGAT AACACGCCGG AGTTCGAGCA ACTGGCGGCC
ATGCAATCGG GCGGGAACGA GATGTCGGTC CGGCGGGGAT CAGCGCTAGG TAAGGCGCTG
CGCACCGAGT ACGTGTCGGG AAATTACTTC ACCACGTTCG GAATTGTTCC TTACACCGGT
CGGCTCATGA CGATGAGTGA TGACGTTACC GGCGCCGCGC CGGCGGTGGT GATGAGCTAC
ACGACGTGGC AGAACGATTA TGCTGGCGAT CCTTCGCTGG TTGGTTCCAC GTTGTATCTG
CAAGGCAAGC CGGTGACGGT GATTGGCATT GCGCCGCCGG GATTCTATGG GGACCGCCTG
CGCAGCAGTC CGCCGGCACT GTGGATTCCG CTGGCAATCG AGCCGGTGCT GGAAGGGAAC
ACTTCGATCC TTCACGTGAG AGAGAGCAAT TGGCTCTATG CAATTGGACG CCTCAAGCCC
GGGGTGCAGA TAGGACCGCT GCAAGCGAAG GTGTCGAACA CTCTGCGGGT GTGGCTGTCG
GGCGTGGAGA TGTACACCCG CAACGGTGGG AAAGAGGTGA TCCCGAAGCA GCACGTGGTG
ATCGTGCCGG CGGGGGGCGG GATCCAGAAC ATGCAGCAGG AGACCGGGAA GGGCCTGTAT
CTGCTCATGG CGATCTCTGC GCTGGTGTTA TTGGTGGCGT GCGCGAACGT GGCGAACTTG
CTGCTGGCGC GCGGCGCGAC ACGGCGAACG GAAATTTCCA TTCGCATGGC GATGGGCGCG
GCGCGGAAGA GGTTAATTCG CTCGATGCTT GTGGAGAGCG TTCTGCTCGC GTTCATGGCG
GGGCTGGTTG GACTTGTGGT GGCTTACGCG GGAACGCGGA CGATTCTCTC GCTGGCATTC
CCGGATTCGC CGCAGTTGCC TATCCATGCG ACGCCATCGT TACCGGTGTT GGGATTTGCA
CTGCTGTTGT CGCTGGGCAC AGGGGTGATC TTCGGCATCG TGCCGGCGTG GATTACGTCA
CATTCCGATC CGGCAGATGC GCTGCGCGGA ACCAGCCGCA CGACCAAAGA CGGAGCATCG
ATGCCGCAGA AGTGGTTGAT CGTGTTCCAG GCGGCGCTCT CGTTGGCGCT GCTGGTAAGT
GCGGGACTGA TGACGAAGAG CCTGCGCAAC TTGCAGCACC AGGACTTCGG CTTAAAGACC
GACAACCGCT ACGTGGTGCA CTTTGACCTT ATGGGCGCCG GATACACGCC CACCACTTTG
CAGCCGCTGT ATCAGCGATT GGAAGAGCGG TTCGGTTCGA TTCCGGGAGT GGACGGTGTA
GGTATCGCGC TCTACAGCAC GCTCGAGGGA AACAACTGGG GCGAGGGCAT TCGTATAGAA
GGGCGTCCGG AGCCGGGGCC GCAGGAGGAT AACGGGTCGT CGTGGGACCG TGTGAATCCG
CAATTCTTCA AGATGATGGG TCAGCCGATT CTGCGCGGGC GCGGGTTACA GGAGTCGGAC
ACGCCGACAT CGCAGTTCGT GGCGGTGGTC AACGAGGCGT TTGTGAAGAA GTTCTTCCCG
AAGGAAGAGC CGATCGGCAA GCACTTCGGA GTTTTCGATA TGAAGTATTC CGGTGCGTTC
GAGATCGTGG GAGTGGTGAA GGACGCCAAG TATCAGGACC CGCACCAGAA GATGCGAGCG
ATGTATTTCC GTCCGCTGAC GCAGGAATTG AAAGTGGAAG AACCGAACGC CAAAATGGCG
GAGGGACGAT CGCTCTACGC CAACTCGATC ACGCTGCACT TTTCGCAGCC GCCATCGAAC
GTGGATGAAC TGGTCCGGAG GACGCTGGCG GACATTGATC CCAACATCAC GATCAACAGC
CTGCATTCGC TGGAATTCCA GATTGGCGAC AACCTCACAC AGGAACGTTT GATTTCACGG
CTGACGATGT TGTTTGGCGC ACTCGCGCTG ATACTCGCGT CGGTGGGACT GTACGGAATT
ACGTCGTATG CGGTGGCCCG CCGGACGGGG GAGATTGGAT TGCGGATGGC CCTTGGTGCG
GACCGCGGCA ACGTGGTGCG GCTGGTATTG CGTGGGGTAG CCGTTCGAGT GGGATTGGGG
CTGGCGATTG GGATCCCGCT CACGCTGATC GGGGGGCATT ACATGGCGGA CCAGCTCTAC
AACGTGAAGG CGTGGGACCC GGCGAGTCTG GCGATCGGGA TCGCGGTGCT GTCGGCTGCG
GCGCTGGTGG CAGGATTTAT TCCGGCGCGG AGGGCGGCAA GTATTGAGCC AATGCAGGCT
TTAAGGATTG AGTGA
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| Protein sequence | MHDVRLAFRQ FLKSPGFVFT VVLTIALGIG ANTAIFTLVH AVLLKSLPVV DPNTLYRIGD
KDDCCVNGGF MGDDGDFDLF SYDLYTSLRD NTPEFEQLAA MQSGGNEMSV RRGSALGKAL
RTEYVSGNYF TTFGIVPYTG RLMTMSDDVT GAAPAVVMSY TTWQNDYAGD PSLVGSTLYL
QGKPVTVIGI APPGFYGDRL RSSPPALWIP LAIEPVLEGN TSILHVRESN WLYAIGRLKP
GVQIGPLQAK VSNTLRVWLS GVEMYTRNGG KEVIPKQHVV IVPAGGGIQN MQQETGKGLY
LLMAISALVL LVACANVANL LLARGATRRT EISIRMAMGA ARKRLIRSML VESVLLAFMA
GLVGLVVAYA GTRTILSLAF PDSPQLPIHA TPSLPVLGFA LLLSLGTGVI FGIVPAWITS
HSDPADALRG TSRTTKDGAS MPQKWLIVFQ AALSLALLVS AGLMTKSLRN LQHQDFGLKT
DNRYVVHFDL MGAGYTPTTL QPLYQRLEER FGSIPGVDGV GIALYSTLEG NNWGEGIRIE
GRPEPGPQED NGSSWDRVNP QFFKMMGQPI LRGRGLQESD TPTSQFVAVV NEAFVKKFFP
KEEPIGKHFG VFDMKYSGAF EIVGVVKDAK YQDPHQKMRA MYFRPLTQEL KVEEPNAKMA
EGRSLYANSI TLHFSQPPSN VDELVRRTLA DIDPNITINS LHSLEFQIGD NLTQERLISR
LTMLFGALAL ILASVGLYGI TSYAVARRTG EIGLRMALGA DRGNVVRLVL RGVAVRVGLG
LAIGIPLTLI GGHYMADQLY NVKAWDPASL AIGIAVLSAA ALVAGFIPAR RAASIEPMQA
LRIE
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