Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3036 |
Symbol | |
ID | 4071943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3603262 |
End bp | 3604656 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637985055 |
Product | amino acid transporter |
Protein accession | YP_592111 |
Protein GI | 94970063 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0805799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACGACCG CGTCGTCCCC GATGAGCGCT TCTCCTGCCC CGATCGACCC CCATCATCTC CCCAGCGAAA AACGCATTCA TCTCCTCGCC CTTGCCGCCA TCATTTTCTT CACCACGTGC GGCGGAGCCT TCGGACTCGA GCCGCTCATC GGCGCTGTTG GCCCTGCGCT CTCGCTCGTC TTCATCCTTG TCACTCCGCT GCTCTGGAGC CTCCCAACCG CATTGATGGT CGCCGAACTC ACCGCGATGA TGCCCGAAGA AGGCGGCTTC TATGTCTGGA TCCGCGAAAC GTTTGGCTCG CTTTGGGCCG TGCAACAGGC CTGCTGGACG ATGACCATCT CCGTCATCTG GCTGGCGATG TATCCCATCC TCTTCGTCGG CTATCTCGGA TTCCTAATCC CGGAGATCGC CGCACCCGCG CACCCGTTCC TCCGCTGGGG AATTACGGGC CTCATGATTG CTAGTGGGCT GCTATTGAAT CTCCGCGGTT CACATACCGT CGGAGGCGCC GCCCAGATCG TCACCAGCAT CGTGCTCGGC ACCTTCGTCG TCATGCTCAT TACATGGCTG GCGCGCCTCC ATAATCCCCG ACTCATCCCT GGCATCCTTC ATCGCGATAT CCGCACACCG CATCCCGGCG CGCTGCTGCT CGGGATCTCC TTCACAGTCT TCAATTATTC CAGTTGGGAT AGCGTCTCAA CCTACGCTGG CGAAGTCGAT CAGCCGCAGC GCAATTACCC GCGCGCCATC ATCTATGCGC TCGCCCTCAC CGTGCTTTGC TATTTGATTC CGGTGGCCGC TGGCATCACC GTTACCACTG ACGCCAACAT CTGGAGCAGC GACCAAGGCT GGCCGGTAAT CGCGCGCCTC ATCGGCGGAA CCTGGCTGGG TACACTCATG GCCGGCGCGG GCCTTGCTTC GATCTGGGGA TTGTTCAACG GCCAGCTTCT CTACGTCTCG CGCCTTCCGT ATGCGCTCGC CCGCGACGGA TGGCTGCCTA AGATTTTCGC GAAAACTTCC ACCGACACCG CCCCGCCTCG TGCCGCGCTC TTCGCTTTTT GCGGCATCAC CGCACTCTTC ACCGCGTTCT CTCTCGGGTC CCTGGCGATC ATCCAATGCG TGCTTTACTG TGCTGCGCTT ACCCTCGATT TTCTCGCTCT CTTCATGCTC CGGATTCGAC GTCCGCACGC CGAGCGCAGC TTCAGCGTGC CCGGTGGCTG GCTCGGCATC GCCTACGTCT GCGTTTCTCC GTTTATCTTT GCGTTGTTTG TGCTGTATGC CGGTCTGCGC GACTGGCGAG CCTATCCGGG ACAACTTCTC GTCATCCCGC TAGTCACCGC CGCTGGTCTT TGCCTGTACT ATTCCCGGCG CACTCGAGCT AGTGCCGGTT CATGA
|
Protein sequence | MTTASSPMSA SPAPIDPHHL PSEKRIHLLA LAAIIFFTTC GGAFGLEPLI GAVGPALSLV FILVTPLLWS LPTALMVAEL TAMMPEEGGF YVWIRETFGS LWAVQQACWT MTISVIWLAM YPILFVGYLG FLIPEIAAPA HPFLRWGITG LMIASGLLLN LRGSHTVGGA AQIVTSIVLG TFVVMLITWL ARLHNPRLIP GILHRDIRTP HPGALLLGIS FTVFNYSSWD SVSTYAGEVD QPQRNYPRAI IYALALTVLC YLIPVAAGIT VTTDANIWSS DQGWPVIARL IGGTWLGTLM AGAGLASIWG LFNGQLLYVS RLPYALARDG WLPKIFAKTS TDTAPPRAAL FAFCGITALF TAFSLGSLAI IQCVLYCAAL TLDFLALFML RIRRPHAERS FSVPGGWLGI AYVCVSPFIF ALFVLYAGLR DWRAYPGQLL VIPLVTAAGL CLYYSRRTRA SAGS
|
| |