Gene Acid345_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3030 
Symbol 
ID4071585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3595973 
End bp3596929 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content61% 
IMG OID637985049 
Producthypothetical protein 
Protein accessionYP_592105 
Protein GI94970057 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5459] Predicted rRNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.93082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAATTC CAGATGAGTT GAAGCGCGCG ATTGACGACC AGGCGGCCGG TATTCCGGGA 
ATCACTCGCG CCGCTGCCGA TGTCAGCGCA GCATATCGAA AGGGCGAGTT CGATTCCGCT
CCGTTGAAGA CGGCTACGCA TCGACTTGCG TATCTGCAGG TTCGGATGCC CGCGACCTAC
GCGGCCTGCC GACACGTCTT CCAGAAAACG CAGGAGAAGA TGCCAGGCTT CGCTCCGGAA
TCACTGCTCG ATCTCGGCGC GGGACCGGGC ACAGCTTGCT GGGCAGCAGT GGAACTCTTC
CCTTCTATCC AGAAGGTCGC GCTGGTGGAA CGCGATCTCG AACTGTTACG TATGGGGAAA
TCGCTCGCGC AAAGTTGTGA GCCTCTGAAG AACGCCAACT GGCTCTCCGC CGACATTCGC
GCCTTCACGC CCGATGCGCA CGATCTCGTC GTCATTTCTT ATACTCTCGG CGAACTCAAG
GCCGCTGAAG CGCAGCGTCT CGTTCGCGCC GCATGGAAAG TTGCGAAGTT GCTTATCCTG
ATCGAGCCCG GCACACCCAA AGCGTTCGCC CGAATGGCCG ACCTCCGCAA ACAGCTCATT
GCAGACGGCG CCACGATGGC CGCTCCCTGC CCGCACGAAC GCGAATGTCC GCTTCTCGTT
CGCGGCGATT GGTGCCACTT CTCCGAACGG CTCGAACGTA CTGCGGAACA TCGCCGCATC
AAGGGGGGCT CGCTCGGCTA TGAAGATGAG AAGTTTTGCT ACCTCTCAGC CACGCGATTG
CCGCTCGCAG ACCGTCGCGG CCGAATCGTG CGCCATCCGC GGATTCATTC CGGCTTCGTG
CAATTGGAAG TCTGCGCGCC GGACGACCTG AAAAAGATCA CGGTCACGAA GTCGCTGAAA
GAGACCTACC GCTCCGCCCG CAAAGCCGAG TGGGGCGACC AGTGGTCGTC TAGCTGA
 
Protein sequence
MRIPDELKRA IDDQAAGIPG ITRAAADVSA AYRKGEFDSA PLKTATHRLA YLQVRMPATY 
AACRHVFQKT QEKMPGFAPE SLLDLGAGPG TACWAAVELF PSIQKVALVE RDLELLRMGK
SLAQSCEPLK NANWLSADIR AFTPDAHDLV VISYTLGELK AAEAQRLVRA AWKVAKLLIL
IEPGTPKAFA RMADLRKQLI ADGATMAAPC PHERECPLLV RGDWCHFSER LERTAEHRRI
KGGSLGYEDE KFCYLSATRL PLADRRGRIV RHPRIHSGFV QLEVCAPDDL KKITVTKSLK
ETYRSARKAE WGDQWSSS