Gene Acid345_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3027 
Symbol 
ID4071582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3592684 
End bp3593520 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID637985046 
Productglutamate--tRNA ligase 
Protein accessionYP_592102 
Protein GI94970054 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.968888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.390374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTCCT ATCGCGGCCG CATCGCGCCT TCTCCCACCG GCTATCTTCA TCTTGGCCAC 
GCGCGAACCT TCTGGACGGC CTACCAGCGC TCCCTTCAAT GCAACGGCAC TTTGATCTTT
CGCAATGAAG ACCTCGATCC CCAACGCTCG AAGCCGGAGT ATGCGAGCGC GATGATTGAA
GACCTACGCT GGCTTGGGAT CGTGTGGCAG GAGGGGCCAG ATGTCGGCGG CCCGCATGAG
CCGTATGAAC AGAGTAAGCG GCGCGAGTTC TATTTGCGCG ATTGGCGATT GCTGGTGGAG
CGGGGATTCG TGTATCCGTG CACGTGTTCG CGGAAGGACC TGGCACTGAG CGCCCAGGCG
CCGAATGAAG GCGACGAGGA GCCGGTGTAT CCGGGGAAGT GCCGGCCCGC GCCGGGAGCA
ACCTTCGAAA CGATCGATCC AGCGGCCGTG AACTGGCGGT TCCGCGTGCC TGACGGCGAG
ACCATTCGTT TCGTGGATGC CAATCTCGGC GAGCGAAGTT ATGTCGCGGG GAAGGATTTT
GGCGACTTCG TGCTGTGGCG GCGCGACGAC GTTCCCGCGT ATCAGCTTGC GGTTGTCACA
GACGATTGTG ATATGCAGGT AACCGAGGTG GTTCGTGGCG AAGATCTGCT GGTTTCGACG
GCGCGGCAGA TATTGCTTTT CAATGCGTTA GGTCGCGCGG TGCCGCGGTT CTATCACTGT
CCGCTGCTCC GGGATGCCTC CGGAGAGCGC TTGGCGAAGC GTACAGACGC GCTCAGTCTT
CGTGAGCTGC GGAAAAAAGG CTACACCCCG GAACAGATTC AGGAGATGTG GGCCTGA
 
Protein sequence
MSSYRGRIAP SPTGYLHLGH ARTFWTAYQR SLQCNGTLIF RNEDLDPQRS KPEYASAMIE 
DLRWLGIVWQ EGPDVGGPHE PYEQSKRREF YLRDWRLLVE RGFVYPCTCS RKDLALSAQA
PNEGDEEPVY PGKCRPAPGA TFETIDPAAV NWRFRVPDGE TIRFVDANLG ERSYVAGKDF
GDFVLWRRDD VPAYQLAVVT DDCDMQVTEV VRGEDLLVST ARQILLFNAL GRAVPRFYHC
PLLRDASGER LAKRTDALSL RELRKKGYTP EQIQEMWA