Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3020 |
Symbol | |
ID | 4071575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3583785 |
End bp | 3584609 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637985039 |
Product | putative signal peptide protein |
Protein accession | YP_592095 |
Protein GI | 94970047 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0732227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTACGCA GAGTAGCTTT TGCAATGTTA GCCCTGGTTT GTGCTGCTCC AGTTGTGCAT GCACAGACTG CTGATGAAAT CATCGCCAAG AATATTGAAG CCCACGGCGG CGCCGCCAAG ATGAAGGCCA TTAAAACCAT GAAGGCCACC GGCAAGATCG AGATTGGTCC CGGTATGCAG GCTCCGATGA CCGCCACGCA GCAACGCCCA GACATGATCC GGAACGAGTT CACCTTCCAG GGCATGACGG GTGTGCAGGC CTACGACGGC AAGGAAGCAT GGCAGATCAT GCCGTTCATG GGAAAGAAAG ATCCCGACCT TATGTCCGCC GATGAACGTG ACGACATGGC CGACAGCGCC GACCTTGATG GCCCGCTGAT GGACTACGCC GCGAAGGGCA ATAAGGTCGA ATACCTTGGC AAAGATAAGC TCGAGGGCAC CGACGTCTAC AAGCTGAAAG TCACGCTGAA GGACGGCTCG ATCCAGACCT GGTACATCGA CACCGATTCG AACCTCGAGG TCCGTGTGGA CAGCGAGCGC ATGGTTCGTG GTACGCCGCA CAAGAACACG CGCGTGATCG GCGACTACAA AGAGGTTGAA GGGCTACCGG TCCCGTTCTC GATGGAAATG AGCGACGCCG ATCATCCAGA CCAGAAGATG AAGCTCACGC TTGAGAAGGT GGAATACAAC GTGCCGGTGG ACGCCTCAAT CTTCAAGATG CCTCCGAAGA CCGCTACCAC CACGAAGGGC GCCGACACCG CAGAGCCGAA GCCGGCAGAC AAGAAGCCGG ACGAAGCTCC GAAATCCGAA ACACCGAAAA ATTAA
|
Protein sequence | MLRRVAFAML ALVCAAPVVH AQTADEIIAK NIEAHGGAAK MKAIKTMKAT GKIEIGPGMQ APMTATQQRP DMIRNEFTFQ GMTGVQAYDG KEAWQIMPFM GKKDPDLMSA DERDDMADSA DLDGPLMDYA AKGNKVEYLG KDKLEGTDVY KLKVTLKDGS IQTWYIDTDS NLEVRVDSER MVRGTPHKNT RVIGDYKEVE GLPVPFSMEM SDADHPDQKM KLTLEKVEYN VPVDASIFKM PPKTATTTKG ADTAEPKPAD KKPDEAPKSE TPKN
|
| |