Gene Acid345_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3020 
Symbol 
ID4071575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3583785 
End bp3584609 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content57% 
IMG OID637985039 
Productputative signal peptide protein 
Protein accessionYP_592095 
Protein GI94970047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0732227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACGCA GAGTAGCTTT TGCAATGTTA GCCCTGGTTT GTGCTGCTCC AGTTGTGCAT 
GCACAGACTG CTGATGAAAT CATCGCCAAG AATATTGAAG CCCACGGCGG CGCCGCCAAG
ATGAAGGCCA TTAAAACCAT GAAGGCCACC GGCAAGATCG AGATTGGTCC CGGTATGCAG
GCTCCGATGA CCGCCACGCA GCAACGCCCA GACATGATCC GGAACGAGTT CACCTTCCAG
GGCATGACGG GTGTGCAGGC CTACGACGGC AAGGAAGCAT GGCAGATCAT GCCGTTCATG
GGAAAGAAAG ATCCCGACCT TATGTCCGCC GATGAACGTG ACGACATGGC CGACAGCGCC
GACCTTGATG GCCCGCTGAT GGACTACGCC GCGAAGGGCA ATAAGGTCGA ATACCTTGGC
AAAGATAAGC TCGAGGGCAC CGACGTCTAC AAGCTGAAAG TCACGCTGAA GGACGGCTCG
ATCCAGACCT GGTACATCGA CACCGATTCG AACCTCGAGG TCCGTGTGGA CAGCGAGCGC
ATGGTTCGTG GTACGCCGCA CAAGAACACG CGCGTGATCG GCGACTACAA AGAGGTTGAA
GGGCTACCGG TCCCGTTCTC GATGGAAATG AGCGACGCCG ATCATCCAGA CCAGAAGATG
AAGCTCACGC TTGAGAAGGT GGAATACAAC GTGCCGGTGG ACGCCTCAAT CTTCAAGATG
CCTCCGAAGA CCGCTACCAC CACGAAGGGC GCCGACACCG CAGAGCCGAA GCCGGCAGAC
AAGAAGCCGG ACGAAGCTCC GAAATCCGAA ACACCGAAAA ATTAA
 
Protein sequence
MLRRVAFAML ALVCAAPVVH AQTADEIIAK NIEAHGGAAK MKAIKTMKAT GKIEIGPGMQ 
APMTATQQRP DMIRNEFTFQ GMTGVQAYDG KEAWQIMPFM GKKDPDLMSA DERDDMADSA
DLDGPLMDYA AKGNKVEYLG KDKLEGTDVY KLKVTLKDGS IQTWYIDTDS NLEVRVDSER
MVRGTPHKNT RVIGDYKEVE GLPVPFSMEM SDADHPDQKM KLTLEKVEYN VPVDASIFKM
PPKTATTTKG ADTAEPKPAD KKPDEAPKSE TPKN