Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3018 |
Symbol | |
ID | 4071573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3580991 |
End bp | 3582559 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637985037 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_592093 |
Protein GI | 94970045 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0381782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAT CCAGACCAAC TCGTGACACG GTACCTCCGA GCGCCGGGAG CATCGATCCG TCATTGTATG AGGCGGTATT TCACAACTCG CTCGACGGCA TCCTGATTGC CGACGACGAT GCCCGTTACA TTGACGTCAA TGCAGCGGCC TGCGAAATCG TCGGCCGCAC GCGGAAGGAA CTCATCGGCG AGCGCGTCGG GACTTTCGTT GAACATCCCA GCGACGCGCA AGTTCTTTGG GAAAAGGCAA AGCAATCCGG GACCATCCGA GCGGAGATCG CGGTGCTTCG ACCCGACGGA CAGAAGCGGT ATATCGAATT CACCGCCGTC GCGAATTTTG TTCCGGGTCG GCATCTCATC CTGGTTCGCG ACTTCACTCA CCGGCGCAAT CTGGACGAAC AGATTCGCAA TGCTTCGAAG ATGGAGGCGA TCGGACGCCT GGCCGGCGGC GTCGCCCACG ACTTCAACAA TCTGTTGATG GTCATCACCA GCTATACCGA GTTGATGCTC GATTCCATGG CGGACTTCGA TCCGCTACGG AAAAAGGCAC AAGAGGTCTT GAAGGCTTCG GCTCGTGCGG CCAGCCTCAC CCGCCAGCTT CTTGCATTCA GCCGCAAGCA GGTACTCGAT CCTCAGTTCC AGGACTTCAA TATTTTGCTT CGCGAGATGT CGAAGCTGCT TGGGCGGGTG CTCGGTGAAA ACGTGGAAGT AAAGCTCGAC CTGAGGGAAA ACCTCGGCAG CGTCTATGCC GACCGCGGTC AGATCGAACA GATCATGATG CATCTCGCGG TGAACGCCCG AGACGTCATG CCCGAAGGCG GAAGGTTTAC GGTCCGAACT GCTAACGTGG ACTTCGACGG GTCCTACTCG CGCCTGCCGG GATCGCCTCC GCCGGGTGAA TTCGTGATGA TGTCCGTCGA AGATACAGGG AATGGCATGA GCCGCGACGT TCTCTCTCAC CTCTTCGAAC CGTTCTTCAG CACCAAGGCA ATGGGGAAGG GGACTGGTTT GGGGCTCGCC GCTGTCTATG GCATCGTCAA GCAAAGTGGT GGTTTCATTT GGGTAGATAG CGAAGAAGGA CATGGATCGC GTTTCAAGAT GTACTTCCCG CGCGCCGTCC AGGGTAAAGA AGAGCAACTC GGCAGGCGTG CGTCGTTCAT TCCAGAGACC CGTCCCGCCG TCGTATTGCT GGTTGAGGAC GAAGAGGCGC TACGCGCGGC TGCCGGCGAT TTCCTGGAGA CCCGCGGCTA CAAAATCATG ACCGCCCGCG ACGGCACGGA AGCGCTGAGT ATGGCTTCCA AGTTCGCCGA ACGCATTGAT GTATTGATCA CCGATCTCGT TATGCCCGGA ATCAGCGGCA GGGTTCTGGC GCAGGAACTA GTTAAAATCC ATCCCGAGAC TAAGGTCATG TACATGTCGG GATACGACGA CGAGACCGTT ATGGTGAATG GGGAGATAGA TTCCTCGAGC GCATTTCTAA GGAAGCCCTT CCGCATGGAT GCACTCTCCG CTAAGATTCG TGAAGTTCTC GGCGAAGAGT CTCGCAGTAG CGGCAGCGGA CCAACATAA
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Protein sequence | MAESRPTRDT VPPSAGSIDP SLYEAVFHNS LDGILIADDD ARYIDVNAAA CEIVGRTRKE LIGERVGTFV EHPSDAQVLW EKAKQSGTIR AEIAVLRPDG QKRYIEFTAV ANFVPGRHLI LVRDFTHRRN LDEQIRNASK MEAIGRLAGG VAHDFNNLLM VITSYTELML DSMADFDPLR KKAQEVLKAS ARAASLTRQL LAFSRKQVLD PQFQDFNILL REMSKLLGRV LGENVEVKLD LRENLGSVYA DRGQIEQIMM HLAVNARDVM PEGGRFTVRT ANVDFDGSYS RLPGSPPPGE FVMMSVEDTG NGMSRDVLSH LFEPFFSTKA MGKGTGLGLA AVYGIVKQSG GFIWVDSEEG HGSRFKMYFP RAVQGKEEQL GRRASFIPET RPAVVLLVED EEALRAAAGD FLETRGYKIM TARDGTEALS MASKFAERID VLITDLVMPG ISGRVLAQEL VKIHPETKVM YMSGYDDETV MVNGEIDSSS AFLRKPFRMD ALSAKIREVL GEESRSSGSG PT
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