| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3014 |
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| Symbol | |
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| ID | 4071569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3573555 |
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| End bp | 3576953 |
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| Gene Length | 3399 bp |
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| Protein Length | 1132 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637985033 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_592089 |
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| Protein GI | 94970041 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.829917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00701741 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACTCTTG TACCGTTTTG CAACCTGCCA ATTGTTTGCA ACCGATTGGC GTTCCGGCGT
ATTGTGCGTA CTAGCGCTGA CAACTCCTCG TCTACAGAGA ACATGGCGGA TCATAAGGAT
TTCCGGCAGA GCTTAGTCGC AAATGGGGCT GCCGAGACCT CCCTTGGCGA CGAGCGCCTT
CGCACGTTTT TCGAGAACTC TCCCGAAGCG ATCGCGATCC TCCACTCCGA CCTCACGATT
GAGCGCGTAA ACCTTGAGTT CACAAGAACC TTCGGCTACC AGGCCGATGA AGTCGTCGGC
GTTGATATTC GAAGACTTCT TTGCGAGGAA GGCTCCACCG CTACCGACTA CGCCTTTTTC
GAGCGAGCCT TGGCCGGCGA GACCCTCAGC CTGGAGGCAA CTCGCAAGCG CAAAGACGGC
ACCACTCTTG AGGTTTCCGT CCTTGTGCGG CCGATTACGA CGGAAGACGG CCGCCTCGGT
CTCTACAGTA TTTACCGCGA AATTACGCAA CAGAAGCAGA TGGAGCGCCT CCAGTCCGCG
CTCTACCGGA TCGCCGACAA GGCCAACTCC GCTCTTGATC TCCAGGAACT CTACAAGGCG
ATCCACAGCA TTCTGCAGGA GTTGATGTAC GCCAAGAATT GCTACATCGC TCTGCACGAT
CCCGTAACGG ATATGGTCAG CTTCCCGTAT TTCGTGGATG AGAAGGACCC GCCGTTCCCG
CCGCACCGGT TTGGTAAAGG CCTTACTGAG TACGTGCTTC GTATGGGGAA GGCGCTCCTC
GCTACACCGG ACTCGTTAGA AGAACTCGTT CGTCGCGGAG ATCTGGAGCG CGCAGGATCG
CCCTCTCTCG ACTGGATGGG AGTTCCACTT AAAAAGGGCG ACCACACTTT CGGGACCCTG
GTGGTGCAGT CCTACCGCGA AAACGTGCGG TACGGAGAAC ACGAGAAGGA GATTCTCACC
TTCGTATCGC AGCAGATTGC GAACGCCGTC GAACACCGCC GCAACCAGGA AGCGGTCCGC
GAGAGCGAAA ATAAGTTTCG CGGACTTGCG GAAACCGCCG TCCAGGCGAT CTTCATCTAC
GACGGCGCGC GCTTCCTTTA TGTGAATGCC GCTACAGAAG CCATTTTCGG ATACTCGCGC
CGCGAGTTGC TCGCTATGGA AGATGCGTGG TCGCTCGTAG ATCCCGAATC GCGCAACTGG
ACGCGACAGC GCCTTCTACA ACAGCTCAAC GGCTCGGCAG AACCTACCCG CTTCGAGTTC
AAAATCACGA CTCGCTCCAA CGAAGAACGG TGGCTCGACT TCAGTTCGAA CCGCATTGAA
TTCGAACGCC GTGCCGCCAT TGTCGCCACG GCGGTGGACA TTACCCAACG CAAAAAAGCC
GAGCAGCTTC AGTCGGCTCT GTACCGCATC GCAGAAGAGA CCAGCGAAGC GCGCGATCTC
GACGAGTTCT ACCGTTTCAT TCACCGCGTC GTCGCCGGCC TGATGCATGC CGAGAATTTC
TATATCGCGC TCTTTGACGA TAAGAGCGAG ATGCTGAGCT TCCCCTATTT CGTGGACGAA
GAGGACGAAC GTCCAGAAAA GAAGACGTTA GGGAAAGGTC TCACGGAATA CGTTCTGCGT
ACTGGCCAGC CGCTGCTCGC TACTCCAGCG GTGTTCGAGG ACCTGATCGC ACGTGGCGAA
GTCGAAGCCA TCGGCGCACC GTCTCTCGAC TGGCTTGGCG TCCCGCTGAT CATCAGTGAC
AAAGTCATCG GCGTGCTTGT CGTGCAGACC TATCGTGAGA ACATTCGCTA CCGTCAGACC
GAAAAAGACA TTCTCACCTT CGTCTCGCAG CACGTAGCCG CTGCCATCGA GCACAAGCGC
AGCGAAGATC AACTACGCTC TTCAGAACAA CGCTACCGCT CTCTGGTGCA AAGCGCTGTC
TACGGCATTT ATCGTTCGAC GGTGGACGGC CACTTCATCG CAGTCAACCC GGCACTCATC
GCAATGCTCG GATACCAGAC AGAAGACGAG ATGCTCTCGC TGAACATCGC AAGGGACGTT
TACCTCGATT CCTCAGACCG CGAAAACTTC GTCGCTGAAT TCATGAGCCT GAAGCGCTGG
GAAGGCGTTG AGGTGAAGTG GAAGCGCAAG GATGGCAAAT CCATTACCGT GCGCTTGAGC
GGCCGTCTAG TCAGTGATGA AGCCGGCGAG GCCGGCTATG TCGAGGGCAT TGTCGAGGAC
GTCACCGAGC GCCGGATGCT CGAGCAGCAA CTGCGGCAAT CGCAGAAAAT GGAAGCTGTC
GGACGCTTGG CTGGCGGCGT CGCGCACGAC TTCAATAATC TTTTGACCGT CATTCGCGGA
TACACCGAGA TTCTGCTCAG CGACCTGCCG CCGGGTGACG TTCGCCGAGC GGAACTCGAA
GAGATCATGA AGGCAAGCGA TCGCGCCGGC TCGCTGACCC GCCAGTTGCT CGCGTTCAGC
CGCCAACAGG TACTCGCGCC GAAAGTTCTT AATCTGAACA CGATCGTGCA GAACATGCAC
AACCTCTTGC GGCGCCTGCT CGGCGAAGAT ATCGATCTCC AGACCGTACT CGATCCCGAA
ATCGGCCACG TGAAAGCCGA CCCAAGTCAG ATCGAGCAAG TCTTGATGAA CCTCGCCGTC
AATGCGCGCG ACGCCATGCC AATGGGCGGG CGCCTGACAA TCGAAACCAC GAACGTAGAG
CTCACCGAAA ATTGGAGCCG CGACATCATC AGCGCCAAAC CCGGTCCCTA CGTCATGATC
GCCATGACCG ACTCGGGCGC CGGTATGGAC GAGGCGACCA AAGCCCGCGT CTTCGAACCG
TTCTTCACAA CCAAAGAGCA GGGCAAGGGA ACTGGCCTTG GTCTCTCTAC GGCGTACGGC
ATTGTGAAGC AGAGCGATGG TTACATCTCT GTGTACAGCG AAGTCGGCAT CGGTTCGACC
TTCAAGGTCT ATCTCCCGCG CATGGACACA GTTCGCGACA CCAGCAACGC CGCAGGGCCG
ATTCCCGCGA ACGATCGCGG AAGCGAAACC GTGCTGTTGG TAGAAGACGA AGAAGGCGTC
CGCAAGTTGG TGCGTGGAAT TCTCAGCCGC CAGGGTTATC ACGTGCTTGA AGCGACCAGT
GGCGAAGAAG CGCTGGAGAT CGTGCGCGAA TCTACGCAGA AAATCGACAT GCTGCTAAGT
GACGTGGTTC TGGTCGGCAT GAGCGGTCGC GAACTCTCCG AGCGCCTGCG CATCCAGATG
CCCTCACTGA AGGTCATCTA CATGTCGGGA TACACCGACG ACGCCATCGT CCGCCACGGC
GTGCTGACCG AAAGCGCAGA GTTCCTGCAA AAGCCGTTCA CTAGCGACAG CCTGCTTCGC
AAAGTGCGTG CCGTGCTGCA GAAGCGCCAA CTGCAGTAG
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| Protein sequence | MTLVPFCNLP IVCNRLAFRR IVRTSADNSS STENMADHKD FRQSLVANGA AETSLGDERL
RTFFENSPEA IAILHSDLTI ERVNLEFTRT FGYQADEVVG VDIRRLLCEE GSTATDYAFF
ERALAGETLS LEATRKRKDG TTLEVSVLVR PITTEDGRLG LYSIYREITQ QKQMERLQSA
LYRIADKANS ALDLQELYKA IHSILQELMY AKNCYIALHD PVTDMVSFPY FVDEKDPPFP
PHRFGKGLTE YVLRMGKALL ATPDSLEELV RRGDLERAGS PSLDWMGVPL KKGDHTFGTL
VVQSYRENVR YGEHEKEILT FVSQQIANAV EHRRNQEAVR ESENKFRGLA ETAVQAIFIY
DGARFLYVNA ATEAIFGYSR RELLAMEDAW SLVDPESRNW TRQRLLQQLN GSAEPTRFEF
KITTRSNEER WLDFSSNRIE FERRAAIVAT AVDITQRKKA EQLQSALYRI AEETSEARDL
DEFYRFIHRV VAGLMHAENF YIALFDDKSE MLSFPYFVDE EDERPEKKTL GKGLTEYVLR
TGQPLLATPA VFEDLIARGE VEAIGAPSLD WLGVPLIISD KVIGVLVVQT YRENIRYRQT
EKDILTFVSQ HVAAAIEHKR SEDQLRSSEQ RYRSLVQSAV YGIYRSTVDG HFIAVNPALI
AMLGYQTEDE MLSLNIARDV YLDSSDRENF VAEFMSLKRW EGVEVKWKRK DGKSITVRLS
GRLVSDEAGE AGYVEGIVED VTERRMLEQQ LRQSQKMEAV GRLAGGVAHD FNNLLTVIRG
YTEILLSDLP PGDVRRAELE EIMKASDRAG SLTRQLLAFS RQQVLAPKVL NLNTIVQNMH
NLLRRLLGED IDLQTVLDPE IGHVKADPSQ IEQVLMNLAV NARDAMPMGG RLTIETTNVE
LTENWSRDII SAKPGPYVMI AMTDSGAGMD EATKARVFEP FFTTKEQGKG TGLGLSTAYG
IVKQSDGYIS VYSEVGIGST FKVYLPRMDT VRDTSNAAGP IPANDRGSET VLLVEDEEGV
RKLVRGILSR QGYHVLEATS GEEALEIVRE STQKIDMLLS DVVLVGMSGR ELSERLRIQM
PSLKVIYMSG YTDDAIVRHG VLTESAEFLQ KPFTSDSLLR KVRAVLQKRQ LQ
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